Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col18a1P39061 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col18a1P39061 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.67□□□□□ -0.06
Col18a1P39061 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col18a1P39061 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Col18a1P39061 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col18a1P39061 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.67□□□□□ -0.06
Col18a1P39061 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col18a1P39061 Guca2b-202ENSMUST00000106309 697 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
Col18a1P39061 Gm8482-201ENSMUST00000117972 471 ntBASIC14.67□□□□□ -0.06
Col18a1P39061 Gm13841-201ENSMUST00000118829 483 ntBASIC14.67□□□□□ -0.06
Col18a1P39061 Gm11449-201ENSMUST00000119175 476 ntBASIC14.67□□□□□ -0.06
Col18a1P39061 Gm12240-201ENSMUST00000120178 229 ntBASIC14.67□□□□□ -0.06
Col18a1P39061 Plxna4os3-201ENSMUST00000127668 269 ntTSL 3 BASIC14.67□□□□□ -0.06
Col18a1P39061 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC14.67□□□□□ -0.06
Col18a1P39061 Gm8210-201ENSMUST00000178557 483 ntBASIC14.67□□□□□ -0.06
Col18a1P39061 Gm15454-201ENSMUST00000179718 483 ntBASIC14.67□□□□□ -0.06
Col18a1P39061 1810018F18Rik-201ENSMUST00000188253 277 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col18a1P39061 Btg4-202ENSMUST00000213117 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col18a1P39061 Gm19228-201ENSMUST00000214030 717 ntBASIC14.67□□□□□ -0.06
Col18a1P39061 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col18a1P39061 Gm6344-201ENSMUST00000075962 483 ntBASIC14.67□□□□□ -0.06
Col18a1P39061 Cbx3-ps5-201ENSMUST00000091545 544 ntBASIC14.67□□□□□ -0.06
Col18a1P39061 Cbx3-ps2-201ENSMUST00000099421 544 ntBASIC14.67□□□□□ -0.06
Col18a1P39061 AC154537.1-201ENSMUST00000226101 1304 ntBASIC14.67□□□□□ -0.06
Col18a1P39061 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col18a1P39061 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col18a1P39061 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col18a1P39061 Vwa3b-205ENSMUST00000162449 1360 ntAPPRIS P5 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col18a1P39061 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Col18a1P39061 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Col18a1P39061 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col18a1P39061 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col18a1P39061 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col18a1P39061 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Col18a1P39061 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col18a1P39061 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col18a1P39061 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col18a1P39061 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col18a1P39061 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col18a1P39061 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Col18a1P39061 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col18a1P39061 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col18a1P39061 Gm5697-201ENSMUST00000122295 2482 ntBASIC14.66□□□□□ -0.06
Col18a1P39061 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col18a1P39061 Rab29-202ENSMUST00000112386 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col18a1P39061 Nsa2-ps2-201ENSMUST00000120785 773 ntBASIC14.66□□□□□ -0.06
Col18a1P39061 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC14.66□□□□□ -0.06
Col18a1P39061 Zfp419-201ENSMUST00000173446 916 ntBASIC14.66□□□□□ -0.06
Col18a1P39061 Gm24180-201ENSMUST00000179961 110 ntBASIC14.66□□□□□ -0.06
Col18a1P39061 Crip1-206ENSMUST00000200553 516 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Col18a1P39061 Gm43965-201ENSMUST00000203779 789 ntBASIC14.66□□□□□ -0.06
Col18a1P39061 Gm44658-201ENSMUST00000207965 637 ntBASIC14.66□□□□□ -0.06
Col18a1P39061 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC14.66□□□□□ -0.06
Col18a1P39061 Gm18504-201ENSMUST00000220917 929 ntBASIC14.66□□□□□ -0.06
Col18a1P39061 AC192333.3-201ENSMUST00000224041 463 ntBASIC14.66□□□□□ -0.06
Col18a1P39061 Cxcl3-201ENSMUST00000031326 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col18a1P39061 Krtap21-1-201ENSMUST00000078422 748 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Col18a1P39061 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col18a1P39061 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC14.66□□□□□ -0.06
Col18a1P39061 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Col18a1P39061 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Col18a1P39061 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Col18a1P39061 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Col18a1P39061 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col18a1P39061 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Col18a1P39061 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col18a1P39061 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col18a1P39061 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.66□□□□□ -0.06
Col18a1P39061 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col18a1P39061 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Col18a1P39061 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col18a1P39061 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.66□□□□□ -0.06
Col18a1P39061 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col18a1P39061 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Col18a1P39061 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC14.66□□□□□ -0.06
Col18a1P39061 Use1-203ENSMUST00000110054 973 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col18a1P39061 Maats1os-201ENSMUST00000133496 326 ntTSL 3 BASIC14.65□□□□□ -0.06
Col18a1P39061 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Col18a1P39061 Gm24466-201ENSMUST00000179978 109 ntBASIC14.65□□□□□ -0.06
Col18a1P39061 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC14.65□□□□□ -0.06
Col18a1P39061 Tex9-214ENSMUST00000184831 1652 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Col18a1P39061 Trav9n-1-201ENSMUST00000185224 339 ntBASIC14.65□□□□□ -0.06
Col18a1P39061 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC14.65□□□□□ -0.06
Col18a1P39061 1700030N03Rik-206ENSMUST00000191405 651 ntTSL 3 BASIC14.65□□□□□ -0.06
Col18a1P39061 4933436E23Rik-201ENSMUST00000192824 1111 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col18a1P39061 Gm42952-204ENSMUST00000198572 408 ntTSL 3 BASIC14.65□□□□□ -0.06
Col18a1P39061 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC14.65□□□□□ -0.06
Col18a1P39061 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col18a1P39061 AC161877.1-201ENSMUST00000227736 699 ntBASIC14.65□□□□□ -0.06
Col18a1P39061 AC132833.1-202ENSMUST00000228875 1690 ntBASIC14.65□□□□□ -0.06
Col18a1P39061 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col18a1P39061 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col18a1P39061 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Col18a1P39061 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col18a1P39061 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Col18a1P39061 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col18a1P39061 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col18a1P39061 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Col18a1P39061 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms