Protein–RNA interactions for Protein: P35822

Ptprk, Receptor-type tyrosine-protein phosphatase kappa, mousemouse

Predictions only

Length 1,457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtprkP35822 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PtprkP35822 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PtprkP35822 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PtprkP35822 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PtprkP35822 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PtprkP35822 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PtprkP35822 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PtprkP35822 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PtprkP35822 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PtprkP35822 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PtprkP35822 Gm12028-201ENSMUST00000118065 436 ntBASIC17.79■□□□□ 0.44
PtprkP35822 Gm12136-201ENSMUST00000120460 1209 ntBASIC17.79■□□□□ 0.44
PtprkP35822 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC17.79■□□□□ 0.44
PtprkP35822 Gm15373-201ENSMUST00000121495 214 ntBASIC17.79■□□□□ 0.44
PtprkP35822 Gm25288-201ENSMUST00000122800 265 ntBASIC17.79■□□□□ 0.44
PtprkP35822 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PtprkP35822 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PtprkP35822 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PtprkP35822 Gm37688-201ENSMUST00000195195 465 ntBASIC17.79■□□□□ 0.44
PtprkP35822 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC17.79■□□□□ 0.44
PtprkP35822 Gm40414-201ENSMUST00000197608 481 ntBASIC17.79■□□□□ 0.44
PtprkP35822 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC17.79■□□□□ 0.44
PtprkP35822 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC17.79■□□□□ 0.44
PtprkP35822 AC124356.1-201ENSMUST00000221469 698 ntBASIC17.79■□□□□ 0.44
PtprkP35822 AC102569.1-201ENSMUST00000221563 685 ntBASIC17.79■□□□□ 0.44
PtprkP35822 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PtprkP35822 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PtprkP35822 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
PtprkP35822 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC17.79■□□□□ 0.44
PtprkP35822 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PtprkP35822 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PtprkP35822 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PtprkP35822 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PtprkP35822 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PtprkP35822 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PtprkP35822 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PtprkP35822 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PtprkP35822 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC17.78■□□□□ 0.44
PtprkP35822 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
PtprkP35822 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PtprkP35822 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC17.78■□□□□ 0.44
PtprkP35822 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PtprkP35822 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PtprkP35822 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PtprkP35822 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PtprkP35822 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PtprkP35822 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PtprkP35822 Gm5526-201ENSMUST00000153604 423 ntBASIC17.78■□□□□ 0.44
PtprkP35822 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC17.78■□□□□ 0.44
PtprkP35822 Gm7242-201ENSMUST00000221134 705 ntBASIC17.78■□□□□ 0.44
PtprkP35822 CT030035.1-201ENSMUST00000223964 935 ntBASIC17.78■□□□□ 0.44
PtprkP35822 Mptx1-201ENSMUST00000027816 799 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PtprkP35822 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PtprkP35822 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PtprkP35822 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PtprkP35822 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PtprkP35822 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PtprkP35822 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PtprkP35822 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PtprkP35822 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
PtprkP35822 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PtprkP35822 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PtprkP35822 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PtprkP35822 AC151836.1-201ENSMUST00000228730 1637 ntBASIC17.78■□□□□ 0.44
PtprkP35822 AC122273.1-201ENSMUST00000213634 2327 ntBASIC17.78■□□□□ 0.44
PtprkP35822 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC17.78■□□□□ 0.44
PtprkP35822 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PtprkP35822 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PtprkP35822 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PtprkP35822 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PtprkP35822 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PtprkP35822 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PtprkP35822 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PtprkP35822 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PtprkP35822 Myl1-203ENSMUST00000120415 621 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PtprkP35822 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC17.77■□□□□ 0.44
PtprkP35822 Gm6291-201ENSMUST00000179994 309 ntBASIC17.77■□□□□ 0.44
PtprkP35822 Gm28505-201ENSMUST00000190466 680 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PtprkP35822 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC17.77■□□□□ 0.44
PtprkP35822 AC116797.2-202ENSMUST00000223587 1017 ntBASIC17.77■□□□□ 0.44
PtprkP35822 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PtprkP35822 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC17.77■□□□□ 0.44
PtprkP35822 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC17.77■□□□□ 0.44
PtprkP35822 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PtprkP35822 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PtprkP35822 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PtprkP35822 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PtprkP35822 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PtprkP35822 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PtprkP35822 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PtprkP35822 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
PtprkP35822 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PtprkP35822 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PtprkP35822 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
PtprkP35822 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PtprkP35822 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
PtprkP35822 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PtprkP35822 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PtprkP35822 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PtprkP35822 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms