Protein–RNA interactions for Protein: P25799

Nfkb1, Nuclear factor NF-kappa-B p105 subunit, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nfkb1P25799 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC11.72□□□□□ -0.53
Nfkb1P25799 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nfkb1P25799 Rgr-203ENSMUST00000225070 4704 ntBASIC11.71□□□□□ -0.53
Nfkb1P25799 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nfkb1P25799 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nfkb1P25799 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nfkb1P25799 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.71□□□□□ -0.53
Nfkb1P25799 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nfkb1P25799 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nfkb1P25799 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Nfkb1P25799 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nfkb1P25799 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nfkb1P25799 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nfkb1P25799 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nfkb1P25799 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nfkb1P25799 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nfkb1P25799 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nfkb1P25799 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nfkb1P25799 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nfkb1P25799 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nfkb1P25799 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nfkb1P25799 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Nfkb1P25799 Gm13117-201ENSMUST00000120894 691 ntBASIC11.71□□□□□ -0.53
Nfkb1P25799 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nfkb1P25799 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.71□□□□□ -0.53
Nfkb1P25799 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nfkb1P25799 Mir7051-201ENSMUST00000184167 73 ntBASIC11.71□□□□□ -0.53
Nfkb1P25799 Gm37284-201ENSMUST00000193607 539 ntBASIC11.71□□□□□ -0.53
Nfkb1P25799 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.71□□□□□ -0.53
Nfkb1P25799 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC11.71□□□□□ -0.53
Nfkb1P25799 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC11.71□□□□□ -0.53
Nfkb1P25799 CT025551.1-201ENSMUST00000223996 692 ntBASIC11.71□□□□□ -0.53
Nfkb1P25799 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Nfkb1P25799 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nfkb1P25799 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Nfkb1P25799 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Nfkb1P25799 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.71□□□□□ -0.54
Nfkb1P25799 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nfkb1P25799 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Nfkb1P25799 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nfkb1P25799 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Nfkb1P25799 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.71□□□□□ -0.54
Nfkb1P25799 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nfkb1P25799 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Nfkb1P25799 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Nfkb1P25799 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.71□□□□□ -0.54
Nfkb1P25799 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nfkb1P25799 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Nfkb1P25799 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.7□□□□□ -0.54
Nfkb1P25799 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nfkb1P25799 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Nfkb1P25799 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.7□□□□□ -0.54
Nfkb1P25799 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nfkb1P25799 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nfkb1P25799 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nfkb1P25799 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nfkb1P25799 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nfkb1P25799 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nfkb1P25799 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.7□□□□□ -0.54
Nfkb1P25799 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Nfkb1P25799 Gm16219-201ENSMUST00000120096 274 ntBASIC11.7□□□□□ -0.54
Nfkb1P25799 Gm12030-201ENSMUST00000121917 223 ntBASIC11.7□□□□□ -0.54
Nfkb1P25799 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.7□□□□□ -0.54
Nfkb1P25799 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.7□□□□□ -0.54
Nfkb1P25799 Gm17798-201ENSMUST00000182282 1035 ntBASIC11.7□□□□□ -0.54
Nfkb1P25799 Gm42816-201ENSMUST00000198433 325 ntBASIC11.7□□□□□ -0.54
Nfkb1P25799 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.7□□□□□ -0.54
Nfkb1P25799 Gm19091-201ENSMUST00000208120 978 ntBASIC11.7□□□□□ -0.54
Nfkb1P25799 Gm32390-201ENSMUST00000212713 1172 ntBASIC11.7□□□□□ -0.54
Nfkb1P25799 Gm30671-201ENSMUST00000214898 318 ntBASIC11.7□□□□□ -0.54
Nfkb1P25799 Gm3619-201ENSMUST00000219947 775 ntBASIC11.7□□□□□ -0.54
Nfkb1P25799 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nfkb1P25799 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nfkb1P25799 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Nfkb1P25799 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nfkb1P25799 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
Nfkb1P25799 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nfkb1P25799 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.7□□□□□ -0.54
Nfkb1P25799 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nfkb1P25799 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nfkb1P25799 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nfkb1P25799 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nfkb1P25799 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Nfkb1P25799 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nfkb1P25799 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.7□□□□□ -0.54
Nfkb1P25799 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nfkb1P25799 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.7□□□□□ -0.54
Nfkb1P25799 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nfkb1P25799 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nfkb1P25799 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Nfkb1P25799 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nfkb1P25799 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Nfkb1P25799 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.69□□□□□ -0.54
Nfkb1P25799 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.69□□□□□ -0.54
Nfkb1P25799 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Nfkb1P25799 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.69□□□□□ -0.54
Nfkb1P25799 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Nfkb1P25799 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nfkb1P25799 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Nfkb1P25799 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms