Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Col8a2P25318 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC9.46□□□□□ -0.89
Col8a2P25318 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Col8a2P25318 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Col8a2P25318 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Col8a2P25318 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Col8a2P25318 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC9.46□□□□□ -0.89
Col8a2P25318 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Col8a2P25318 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Col8a2P25318 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Col8a2P25318 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Col8a2P25318 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC9.46□□□□□ -0.89
Col8a2P25318 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Col8a2P25318 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Col8a2P25318 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Col8a2P25318 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC9.46□□□□□ -0.89
Col8a2P25318 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Col8a2P25318 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Col8a2P25318 Gm44663-201ENSMUST00000206898 3150 ntBASIC9.46□□□□□ -0.89
Col8a2P25318 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
Col8a2P25318 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
Col8a2P25318 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC9.46□□□□□ -0.89
Col8a2P25318 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Col8a2P25318 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC9.46□□□□□ -0.9
Col8a2P25318 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Col8a2P25318 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Col8a2P25318 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Col8a2P25318 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Col8a2P25318 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Col8a2P25318 Gm14740-201ENSMUST00000118538 1150 ntBASIC9.46□□□□□ -0.9
Col8a2P25318 Gm15617-201ENSMUST00000118973 771 ntBASIC9.46□□□□□ -0.9
Col8a2P25318 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Col8a2P25318 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC9.46□□□□□ -0.9
Col8a2P25318 Gm26047-201ENSMUST00000157308 113 ntBASIC9.46□□□□□ -0.9
Col8a2P25318 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC9.46□□□□□ -0.9
Col8a2P25318 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Col8a2P25318 Gm8492-201ENSMUST00000182375 987 ntBASIC9.46□□□□□ -0.9
Col8a2P25318 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC9.46□□□□□ -0.9
Col8a2P25318 Gm5100-201ENSMUST00000195631 589 ntBASIC9.46□□□□□ -0.9
Col8a2P25318 Gm26047-202ENSMUST00000198840 115 ntBASIC9.46□□□□□ -0.9
Col8a2P25318 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC9.46□□□□□ -0.9
Col8a2P25318 Gm3017-201ENSMUST00000203603 1126 ntBASIC9.46□□□□□ -0.9
Col8a2P25318 Gm5599-201ENSMUST00000209602 788 ntBASIC9.46□□□□□ -0.9
Col8a2P25318 Gm45410-201ENSMUST00000211331 1093 ntBASIC9.46□□□□□ -0.9
Col8a2P25318 AC154257.1-202ENSMUST00000224729 843 ntBASIC9.46□□□□□ -0.9
Col8a2P25318 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.9
Col8a2P25318 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Col8a2P25318 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Col8a2P25318 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Col8a2P25318 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Col8a2P25318 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Col8a2P25318 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Col8a2P25318 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Col8a2P25318 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Col8a2P25318 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Col8a2P25318 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Col8a2P25318 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Col8a2P25318 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Col8a2P25318 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Col8a2P25318 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Col8a2P25318 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Col8a2P25318 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Col8a2P25318 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Col8a2P25318 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Col8a2P25318 Gm45776-201ENSMUST00000212366 1522 ntBASIC9.46□□□□□ -0.9
Col8a2P25318 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Col8a2P25318 Gm37859-201ENSMUST00000195529 2173 ntBASIC9.46□□□□□ -0.9
Col8a2P25318 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Col8a2P25318 Gm43931-201ENSMUST00000204817 2870 ntBASIC9.45□□□□□ -0.9
Col8a2P25318 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col8a2P25318 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
Col8a2P25318 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Col8a2P25318 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col8a2P25318 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col8a2P25318 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Col8a2P25318 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Col8a2P25318 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Col8a2P25318 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col8a2P25318 AC155245.1-201ENSMUST00000222266 1804 ntBASIC9.45□□□□□ -0.9
Col8a2P25318 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col8a2P25318 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Col8a2P25318 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col8a2P25318 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col8a2P25318 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col8a2P25318 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col8a2P25318 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Col8a2P25318 Snord17-201ENSMUST00000104526 238 ntBASIC9.45□□□□□ -0.9
Col8a2P25318 Gm12030-201ENSMUST00000121917 223 ntBASIC9.45□□□□□ -0.9
Col8a2P25318 Mir1901-201ENSMUST00000122616 78 ntBASIC9.45□□□□□ -0.9
Col8a2P25318 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Col8a2P25318 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC9.45□□□□□ -0.9
Col8a2P25318 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Col8a2P25318 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC9.45□□□□□ -0.9
Col8a2P25318 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC9.45□□□□□ -0.9
Col8a2P25318 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC9.45□□□□□ -0.9
Col8a2P25318 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Col8a2P25318 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC9.45□□□□□ -0.9
Col8a2P25318 Gm19015-201ENSMUST00000184002 1189 ntBASIC9.45□□□□□ -0.9
Col8a2P25318 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC9.45□□□□□ -0.9
Col8a2P25318 Gm37638-201ENSMUST00000194337 1123 ntBASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms