Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxd8P23463 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxd8P23463 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Hoxd8P23463 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hoxd8P23463 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.8□□□□□ -0.52
Hoxd8P23463 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxd8P23463 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxd8P23463 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxd8P23463 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hoxd8P23463 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxd8P23463 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hoxd8P23463 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxd8P23463 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hoxd8P23463 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxd8P23463 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxd8P23463 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.8□□□□□ -0.52
Hoxd8P23463 Gm43980-201ENSMUST00000204899 1612 ntBASIC11.8□□□□□ -0.52
Hoxd8P23463 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxd8P23463 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Hoxd8P23463 Gm11979-201ENSMUST00000119629 743 ntBASIC11.8□□□□□ -0.52
Hoxd8P23463 Gm11952-201ENSMUST00000121172 821 ntBASIC11.8□□□□□ -0.52
Hoxd8P23463 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxd8P23463 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxd8P23463 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxd8P23463 Gm5656-201ENSMUST00000171020 1096 ntBASIC11.8□□□□□ -0.52
Hoxd8P23463 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Hoxd8P23463 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.8□□□□□ -0.52
Hoxd8P23463 Gm7719-201ENSMUST00000182374 975 ntBASIC11.8□□□□□ -0.52
Hoxd8P23463 Gm28439-201ENSMUST00000187714 876 ntBASIC11.8□□□□□ -0.52
Hoxd8P23463 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC11.8□□□□□ -0.52
Hoxd8P23463 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxd8P23463 Gm43066-201ENSMUST00000199589 1260 ntBASIC11.8□□□□□ -0.52
Hoxd8P23463 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC11.8□□□□□ -0.52
Hoxd8P23463 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxd8P23463 Tcf25-210ENSMUST00000212880 827 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxd8P23463 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxd8P23463 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxd8P23463 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxd8P23463 AC129975.1-201ENSMUST00000224816 592 ntBASIC11.8□□□□□ -0.52
Hoxd8P23463 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC11.8□□□□□ -0.52
Hoxd8P23463 Vmn1r192-201ENSMUST00000072632 1067 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Hoxd8P23463 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.8□□□□□ -0.52
Hoxd8P23463 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxd8P23463 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxd8P23463 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxd8P23463 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.8□□□□□ -0.52
Hoxd8P23463 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxd8P23463 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxd8P23463 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hoxd8P23463 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.8□□□□□ -0.52
Hoxd8P23463 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Hoxd8P23463 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Hoxd8P23463 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxd8P23463 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxd8P23463 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxd8P23463 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Hoxd8P23463 Paupar-201ENSMUST00000194826 3482 ntBASIC11.8□□□□□ -0.52
Hoxd8P23463 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.8□□□□□ -0.52
Hoxd8P23463 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hoxd8P23463 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxd8P23463 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxd8P23463 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hoxd8P23463 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxd8P23463 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxd8P23463 Gm6170-201ENSMUST00000187672 1388 ntBASIC11.79□□□□□ -0.52
Hoxd8P23463 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxd8P23463 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxd8P23463 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxd8P23463 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxd8P23463 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Hoxd8P23463 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxd8P23463 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Hoxd8P23463 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.79□□□□□ -0.52
Hoxd8P23463 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Hoxd8P23463 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxd8P23463 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxd8P23463 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxd8P23463 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxd8P23463 Gm5641-201ENSMUST00000091130 1488 ntBASIC11.79□□□□□ -0.52
Hoxd8P23463 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxd8P23463 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Hoxd8P23463 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Hoxd8P23463 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Hoxd8P23463 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC11.79□□□□□ -0.52
Hoxd8P23463 Gm14213-201ENSMUST00000119778 768 ntBASIC11.79□□□□□ -0.52
Hoxd8P23463 Gm13981-201ENSMUST00000122360 447 ntBASIC11.79□□□□□ -0.52
Hoxd8P23463 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC11.79□□□□□ -0.52
Hoxd8P23463 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC11.79□□□□□ -0.52
Hoxd8P23463 Gm5529-201ENSMUST00000165691 891 ntBASIC11.79□□□□□ -0.52
Hoxd8P23463 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxd8P23463 Mir6941-201ENSMUST00000184711 59 ntBASIC11.79□□□□□ -0.52
Hoxd8P23463 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Hoxd8P23463 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.79□□□□□ -0.52
Hoxd8P23463 Gm42912-201ENSMUST00000197195 716 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxd8P23463 Trav11n-201ENSMUST00000200113 343 ntBASIC11.79□□□□□ -0.52
Hoxd8P23463 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxd8P23463 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hoxd8P23463 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC11.79□□□□□ -0.52
Hoxd8P23463 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC11.79□□□□□ -0.52
Hoxd8P23463 Gm9487-201ENSMUST00000216600 472 ntBASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms