Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC11.61□□□□□ -0.55
Hoxb3P09026 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Hoxb3P09026 Gm29499-201ENSMUST00000189151 486 ntBASIC11.61□□□□□ -0.55
Hoxb3P09026 Gm28329-201ENSMUST00000191208 689 ntBASIC11.61□□□□□ -0.55
Hoxb3P09026 Gm29171-201ENSMUST00000191397 486 ntBASIC11.61□□□□□ -0.55
Hoxb3P09026 Gm19175-201ENSMUST00000199895 916 ntBASIC11.61□□□□□ -0.55
Hoxb3P09026 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC11.61□□□□□ -0.55
Hoxb3P09026 Gm45094-201ENSMUST00000207013 617 ntBASIC11.61□□□□□ -0.55
Hoxb3P09026 Gm21089-201ENSMUST00000215843 325 ntBASIC11.61□□□□□ -0.55
Hoxb3P09026 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb3P09026 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb3P09026 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC11.61□□□□□ -0.55
Hoxb3P09026 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb3P09026 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb3P09026 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Hoxb3P09026 Gm23680-201ENSMUST00000083162 164 ntBASIC11.61□□□□□ -0.55
Hoxb3P09026 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Hoxb3P09026 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb3P09026 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb3P09026 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb3P09026 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb3P09026 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb3P09026 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb3P09026 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb3P09026 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb3P09026 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Hoxb3P09026 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb3P09026 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb3P09026 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.61□□□□□ -0.55
Hoxb3P09026 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb3P09026 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb3P09026 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Hoxb3P09026 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.61□□□□□ -0.55
Hoxb3P09026 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC11.6□□□□□ -0.55
Hoxb3P09026 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxb3P09026 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxb3P09026 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxb3P09026 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxb3P09026 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxb3P09026 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxb3P09026 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Hoxb3P09026 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxb3P09026 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxb3P09026 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxb3P09026 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
Hoxb3P09026 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Hoxb3P09026 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Hoxb3P09026 Gm13456-201ENSMUST00000118928 1365 ntBASIC11.6□□□□□ -0.55
Hoxb3P09026 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxb3P09026 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Hoxb3P09026 Gm23604-201ENSMUST00000104311 132 ntBASIC11.6□□□□□ -0.55
Hoxb3P09026 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxb3P09026 Gm12774-201ENSMUST00000117881 416 ntBASIC11.6□□□□□ -0.55
Hoxb3P09026 Gm14993-201ENSMUST00000121180 164 ntBASIC11.6□□□□□ -0.55
Hoxb3P09026 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC11.6□□□□□ -0.55
Hoxb3P09026 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC11.6□□□□□ -0.55
Hoxb3P09026 Gm24248-201ENSMUST00000157321 322 ntBASIC11.6□□□□□ -0.55
Hoxb3P09026 Gm25394-201ENSMUST00000157338 133 ntBASIC11.6□□□□□ -0.55
Hoxb3P09026 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.6□□□□□ -0.55
Hoxb3P09026 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC11.6□□□□□ -0.55
Hoxb3P09026 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.6□□□□□ -0.55
Hoxb3P09026 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC11.6□□□□□ -0.55
Hoxb3P09026 Gm28011-201ENSMUST00000184097 175 ntBASIC11.6□□□□□ -0.55
Hoxb3P09026 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Hoxb3P09026 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC11.6□□□□□ -0.55
Hoxb3P09026 Gm37355-201ENSMUST00000193345 606 ntBASIC11.6□□□□□ -0.55
Hoxb3P09026 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.6□□□□□ -0.55
Hoxb3P09026 Gm43177-201ENSMUST00000197032 1107 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxb3P09026 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxb3P09026 Gm45113-201ENSMUST00000207518 165 ntBASIC11.6□□□□□ -0.55
Hoxb3P09026 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC11.6□□□□□ -0.55
Hoxb3P09026 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC11.6□□□□□ -0.55
Hoxb3P09026 Gm8268-201ENSMUST00000209683 458 ntBASIC11.6□□□□□ -0.55
Hoxb3P09026 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.6□□□□□ -0.55
Hoxb3P09026 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Hoxb3P09026 Gm35135-201ENSMUST00000219885 990 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxb3P09026 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC11.6□□□□□ -0.55
Hoxb3P09026 AC129975.1-201ENSMUST00000224816 592 ntBASIC11.6□□□□□ -0.55
Hoxb3P09026 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxb3P09026 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxb3P09026 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxb3P09026 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxb3P09026 Gm17541-201ENSMUST00000080062 525 ntBASIC11.6□□□□□ -0.55
Hoxb3P09026 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC11.6□□□□□ -0.55
Hoxb3P09026 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxb3P09026 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxb3P09026 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxb3P09026 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxb3P09026 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxb3P09026 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxb3P09026 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxb3P09026 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxb3P09026 1700016H13Rik-202ENSMUST00000119824 1447 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Hoxb3P09026 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Hoxb3P09026 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxb3P09026 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Hoxb3P09026 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxb3P09026 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Hoxb3P09026 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Hoxb3P09026 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms