Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
PdgfrbP05622 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
PdgfrbP05622 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.56□□□□□ -0.56
PdgfrbP05622 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC11.56□□□□□ -0.56
PdgfrbP05622 Gm21139-201ENSMUST00000186594 877 ntBASIC11.56□□□□□ -0.56
PdgfrbP05622 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
PdgfrbP05622 Gm9555-201ENSMUST00000200908 583 ntBASIC11.56□□□□□ -0.56
PdgfrbP05622 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC11.56□□□□□ -0.56
PdgfrbP05622 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.56□□□□□ -0.56
PdgfrbP05622 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
PdgfrbP05622 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.56□□□□□ -0.56
PdgfrbP05622 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.56□□□□□ -0.56
PdgfrbP05622 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
PdgfrbP05622 Ginm1-202ENSMUST00000065124 300 ntBASIC11.56□□□□□ -0.56
PdgfrbP05622 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
PdgfrbP05622 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
PdgfrbP05622 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.56□□□□□ -0.56
PdgfrbP05622 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
PdgfrbP05622 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
PdgfrbP05622 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
PdgfrbP05622 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
PdgfrbP05622 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
PdgfrbP05622 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
PdgfrbP05622 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
PdgfrbP05622 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.56□□□□□ -0.56
PdgfrbP05622 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
PdgfrbP05622 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
PdgfrbP05622 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
PdgfrbP05622 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
PdgfrbP05622 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
PdgfrbP05622 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
PdgfrbP05622 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.56□□□□□ -0.56
PdgfrbP05622 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdgfrbP05622 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
PdgfrbP05622 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdgfrbP05622 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.55□□□□□ -0.56
PdgfrbP05622 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdgfrbP05622 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.55□□□□□ -0.56
PdgfrbP05622 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
PdgfrbP05622 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdgfrbP05622 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.55□□□□□ -0.56
PdgfrbP05622 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.55□□□□□ -0.56
PdgfrbP05622 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
PdgfrbP05622 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdgfrbP05622 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC11.55□□□□□ -0.56
PdgfrbP05622 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
PdgfrbP05622 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdgfrbP05622 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdgfrbP05622 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
PdgfrbP05622 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC11.55□□□□□ -0.56
PdgfrbP05622 Gm12165-201ENSMUST00000117047 342 ntBASIC11.55□□□□□ -0.56
PdgfrbP05622 Gm12247-201ENSMUST00000117585 670 ntBASIC11.55□□□□□ -0.56
PdgfrbP05622 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
PdgfrbP05622 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.55□□□□□ -0.56
PdgfrbP05622 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
PdgfrbP05622 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdgfrbP05622 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.55□□□□□ -0.56
PdgfrbP05622 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.55□□□□□ -0.56
PdgfrbP05622 Gm18367-201ENSMUST00000176139 600 ntBASIC11.55□□□□□ -0.56
PdgfrbP05622 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC11.55□□□□□ -0.56
PdgfrbP05622 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.55□□□□□ -0.56
PdgfrbP05622 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.55□□□□□ -0.56
PdgfrbP05622 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
PdgfrbP05622 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.55□□□□□ -0.56
PdgfrbP05622 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.55□□□□□ -0.56
PdgfrbP05622 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdgfrbP05622 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
PdgfrbP05622 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdgfrbP05622 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
PdgfrbP05622 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdgfrbP05622 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdgfrbP05622 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
PdgfrbP05622 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
PdgfrbP05622 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdgfrbP05622 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdgfrbP05622 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdgfrbP05622 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.55□□□□□ -0.56
PdgfrbP05622 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
PdgfrbP05622 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdgfrbP05622 Gm5740-201ENSMUST00000211003 1857 ntBASIC11.55□□□□□ -0.56
PdgfrbP05622 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
PdgfrbP05622 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
PdgfrbP05622 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.55□□□□□ -0.56
PdgfrbP05622 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
PdgfrbP05622 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
PdgfrbP05622 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
PdgfrbP05622 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
PdgfrbP05622 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
PdgfrbP05622 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
PdgfrbP05622 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
PdgfrbP05622 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
PdgfrbP05622 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
PdgfrbP05622 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
PdgfrbP05622 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
PdgfrbP05622 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
PdgfrbP05622 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
PdgfrbP05622 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.54□□□□□ -0.56
PdgfrbP05622 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.54□□□□□ -0.56
PdgfrbP05622 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
PdgfrbP05622 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 142.2 ms