Protein–RNA interactions for Protein: P04202

Tgfb1, Transforming growth factor beta-1, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfb1P04202 Gm12463-201ENSMUST00000118271 849 ntBASIC10.53□□□□□ -0.72
Tgfb1P04202 Gm15566-201ENSMUST00000121130 590 ntBASIC10.53□□□□□ -0.72
Tgfb1P04202 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC10.53□□□□□ -0.72
Tgfb1P04202 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC10.53□□□□□ -0.72
Tgfb1P04202 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC10.53□□□□□ -0.72
Tgfb1P04202 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.53□□□□□ -0.72
Tgfb1P04202 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Tgfb1P04202 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC10.53□□□□□ -0.72
Tgfb1P04202 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.53□□□□□ -0.72
Tgfb1P04202 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC10.53□□□□□ -0.72
Tgfb1P04202 Gm12407-201ENSMUST00000180219 324 ntBASIC10.53□□□□□ -0.72
Tgfb1P04202 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Tgfb1P04202 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC10.53□□□□□ -0.72
Tgfb1P04202 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC10.53□□□□□ -0.72
Tgfb1P04202 Gm18056-201ENSMUST00000207670 568 ntBASIC10.53□□□□□ -0.72
Tgfb1P04202 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Tgfb1P04202 Gm18061-201ENSMUST00000208350 562 ntBASIC10.53□□□□□ -0.72
Tgfb1P04202 Gm18063-201ENSMUST00000208529 568 ntBASIC10.53□□□□□ -0.72
Tgfb1P04202 Gm18052-201ENSMUST00000208750 559 ntBASIC10.53□□□□□ -0.72
Tgfb1P04202 Gm7848-201ENSMUST00000210739 718 ntBASIC10.53□□□□□ -0.72
Tgfb1P04202 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC10.53□□□□□ -0.72
Tgfb1P04202 CT573034.1-201ENSMUST00000222983 313 ntBASIC10.53□□□□□ -0.72
Tgfb1P04202 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tgfb1P04202 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tgfb1P04202 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tgfb1P04202 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tgfb1P04202 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Tgfb1P04202 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Tgfb1P04202 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tgfb1P04202 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Tgfb1P04202 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tgfb1P04202 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tgfb1P04202 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Tgfb1P04202 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tgfb1P04202 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tgfb1P04202 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tgfb1P04202 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tgfb1P04202 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tgfb1P04202 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Tgfb1P04202 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tgfb1P04202 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tgfb1P04202 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Tgfb1P04202 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tgfb1P04202 CT009489.1-201ENSMUST00000227740 1893 ntBASIC10.53□□□□□ -0.72
Tgfb1P04202 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tgfb1P04202 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Tgfb1P04202 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Tgfb1P04202 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Tgfb1P04202 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Tgfb1P04202 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tgfb1P04202 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tgfb1P04202 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tgfb1P04202 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tgfb1P04202 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
Tgfb1P04202 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Tgfb1P04202 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Tgfb1P04202 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Tgfb1P04202 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tgfb1P04202 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfb1P04202 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC10.52□□□□□ -0.73
Tgfb1P04202 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfb1P04202 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfb1P04202 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfb1P04202 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Tgfb1P04202 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfb1P04202 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.52□□□□□ -0.73
Tgfb1P04202 Mir680-2-201ENSMUST00000102163 110 ntBASIC10.52□□□□□ -0.73
Tgfb1P04202 Gm23251-201ENSMUST00000103773 110 ntBASIC10.52□□□□□ -0.73
Tgfb1P04202 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfb1P04202 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfb1P04202 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfb1P04202 Gm11077-201ENSMUST00000111844 84 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Tgfb1P04202 Gm12247-201ENSMUST00000117585 670 ntBASIC10.52□□□□□ -0.73
Tgfb1P04202 Gm12217-201ENSMUST00000118858 696 ntBASIC10.52□□□□□ -0.73
Tgfb1P04202 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC10.52□□□□□ -0.73
Tgfb1P04202 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC10.52□□□□□ -0.73
Tgfb1P04202 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC10.52□□□□□ -0.73
Tgfb1P04202 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.52□□□□□ -0.73
Tgfb1P04202 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC10.52□□□□□ -0.73
Tgfb1P04202 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfb1P04202 Gm18367-201ENSMUST00000176139 600 ntBASIC10.52□□□□□ -0.73
Tgfb1P04202 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfb1P04202 Gm21147-201ENSMUST00000186046 913 ntBASIC10.52□□□□□ -0.73
Tgfb1P04202 Gm37246-201ENSMUST00000192665 835 ntBASIC10.52□□□□□ -0.73
Tgfb1P04202 Gm37835-201ENSMUST00000193305 361 ntBASIC10.52□□□□□ -0.73
Tgfb1P04202 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.52□□□□□ -0.73
Tgfb1P04202 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC10.52□□□□□ -0.73
Tgfb1P04202 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfb1P04202 Gm7183-201ENSMUST00000213870 1005 ntBASIC10.52□□□□□ -0.73
Tgfb1P04202 AC141438.2-201ENSMUST00000215068 271 ntBASIC10.52□□□□□ -0.73
Tgfb1P04202 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.52□□□□□ -0.73
Tgfb1P04202 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC10.52□□□□□ -0.73
Tgfb1P04202 Ntng1-201ENSMUST00000051253 327 ntBASIC10.52□□□□□ -0.73
Tgfb1P04202 4933400A11Rik-201ENSMUST00000068874 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfb1P04202 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfb1P04202 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC10.52□□□□□ -0.73
Tgfb1P04202 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfb1P04202 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfb1P04202 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tgfb1P04202 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms