Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC14.47□□□□□ -0.09
Ubr1O70481 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Ubr1O70481 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ubr1O70481 Gm45206-201ENSMUST00000206885 2285 ntBASIC14.47□□□□□ -0.09
Ubr1O70481 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ubr1O70481 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ubr1O70481 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ubr1O70481 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ubr1O70481 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ubr1O70481 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ubr1O70481 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ubr1O70481 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ubr1O70481 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ubr1O70481 Cd247-205ENSMUST00000161559 1816 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ubr1O70481 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ubr1O70481 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ubr1O70481 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ubr1O70481 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Ubr1O70481 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ubr1O70481 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ubr1O70481 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC14.47□□□□□ -0.09
Ubr1O70481 Gm16518-201ENSMUST00000117960 508 ntBASIC14.47□□□□□ -0.09
Ubr1O70481 Gm14798-201ENSMUST00000139695 1189 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ubr1O70481 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Ubr1O70481 AC141884.2-201ENSMUST00000228811 775 ntBASIC14.47□□□□□ -0.09
Ubr1O70481 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ubr1O70481 Gm25514-201ENSMUST00000083860 135 ntBASIC14.47□□□□□ -0.09
Ubr1O70481 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Ubr1O70481 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ubr1O70481 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ubr1O70481 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Ubr1O70481 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ubr1O70481 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ubr1O70481 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ubr1O70481 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ubr1O70481 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Ubr1O70481 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ubr1O70481 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ubr1O70481 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ubr1O70481 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ubr1O70481 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC14.46□□□□□ -0.09
Ubr1O70481 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ubr1O70481 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC14.46□□□□□ -0.09
Ubr1O70481 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Ubr1O70481 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ubr1O70481 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC14.46□□□□□ -0.09
Ubr1O70481 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ubr1O70481 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Ubr1O70481 Gm8643-201ENSMUST00000195228 625 ntBASIC14.46□□□□□ -0.09
Ubr1O70481 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ubr1O70481 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ubr1O70481 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ubr1O70481 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC14.46□□□□□ -0.09
Ubr1O70481 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ubr1O70481 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Ubr1O70481 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ubr1O70481 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Ubr1O70481 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ubr1O70481 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Ubr1O70481 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.46□□□□□ -0.1
Ubr1O70481 AC122273.1-201ENSMUST00000213634 2327 ntBASIC14.46□□□□□ -0.1
Ubr1O70481 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Ubr1O70481 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubr1O70481 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Ubr1O70481 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubr1O70481 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ubr1O70481 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubr1O70481 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ubr1O70481 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Ubr1O70481 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubr1O70481 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubr1O70481 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC14.45□□□□□ -0.1
Ubr1O70481 1700025C18Rik-201ENSMUST00000109304 702 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubr1O70481 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC14.45□□□□□ -0.1
Ubr1O70481 Gm27826-201ENSMUST00000175282 255 ntBASIC14.45□□□□□ -0.1
Ubr1O70481 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC14.45□□□□□ -0.1
Ubr1O70481 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC14.45□□□□□ -0.1
Ubr1O70481 CT010505.2-201ENSMUST00000227918 998 ntBASIC14.45□□□□□ -0.1
Ubr1O70481 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubr1O70481 Gm38312-201ENSMUST00000195426 1746 ntBASIC14.45□□□□□ -0.1
Ubr1O70481 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubr1O70481 Slc10a1-201ENSMUST00000095572 1674 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubr1O70481 Gm1995-201ENSMUST00000220838 2602 ntBASIC14.45□□□□□ -0.1
Ubr1O70481 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC14.45□□□□□ -0.1
Ubr1O70481 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubr1O70481 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubr1O70481 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubr1O70481 B430203G13Rik-201ENSMUST00000169657 1375 ntBASIC14.45□□□□□ -0.1
Ubr1O70481 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ubr1O70481 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubr1O70481 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC14.45□□□□□ -0.1
Ubr1O70481 Gm5472-201ENSMUST00000178604 1678 ntBASIC14.45□□□□□ -0.1
Ubr1O70481 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubr1O70481 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC14.45□□□□□ -0.1
Ubr1O70481 Gm6238-201ENSMUST00000120999 465 ntBASIC14.45□□□□□ -0.1
Ubr1O70481 Gm16894-201ENSMUST00000181756 842 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ubr1O70481 Mir6359-201ENSMUST00000183668 81 ntBASIC14.45□□□□□ -0.1
Ubr1O70481 Gm37860-201ENSMUST00000195380 1034 ntBASIC14.45□□□□□ -0.1
Ubr1O70481 Fkbp6-202ENSMUST00000201534 1287 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ubr1O70481 Gm6518-201ENSMUST00000208450 342 ntBASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms