Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 AC174797.2-202ENSMUST00000225729 568 ntBASIC9.61□□□□□ -0.87
Cxcl13O55038 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cxcl13O55038 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cxcl13O55038 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cxcl13O55038 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC9.61□□□□□ -0.87
Cxcl13O55038 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cxcl13O55038 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC9.61□□□□□ -0.87
Cxcl13O55038 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cxcl13O55038 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cxcl13O55038 Gm45416-201ENSMUST00000209713 2201 ntBASIC9.61□□□□□ -0.87
Cxcl13O55038 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cxcl13O55038 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cxcl13O55038 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cxcl13O55038 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC9.61□□□□□ -0.87
Cxcl13O55038 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Cxcl13O55038 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
Cxcl13O55038 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cxcl13O55038 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Cxcl13O55038 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Cxcl13O55038 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC9.6□□□□□ -0.87
Cxcl13O55038 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC9.6□□□□□ -0.87
Cxcl13O55038 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cxcl13O55038 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cxcl13O55038 Gm43334-201ENSMUST00000197740 1318 ntBASIC9.6□□□□□ -0.87
Cxcl13O55038 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cxcl13O55038 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cxcl13O55038 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cxcl13O55038 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cxcl13O55038 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cxcl13O55038 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Cxcl13O55038 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Cxcl13O55038 Gm7278-201ENSMUST00000119836 1401 ntBASIC9.6□□□□□ -0.87
Cxcl13O55038 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cxcl13O55038 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Cxcl13O55038 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Cxcl13O55038 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC9.6□□□□□ -0.87
Cxcl13O55038 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Cxcl13O55038 Gm19246-201ENSMUST00000173599 255 ntBASIC9.6□□□□□ -0.87
Cxcl13O55038 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Cxcl13O55038 Gm9081-201ENSMUST00000182346 991 ntBASIC9.6□□□□□ -0.87
Cxcl13O55038 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cxcl13O55038 Gm43671-201ENSMUST00000200422 433 ntBASIC9.6□□□□□ -0.87
Cxcl13O55038 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC9.6□□□□□ -0.87
Cxcl13O55038 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC9.6□□□□□ -0.87
Cxcl13O55038 Gm42655-201ENSMUST00000202782 1134 ntBASIC9.6□□□□□ -0.87
Cxcl13O55038 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC9.6□□□□□ -0.87
Cxcl13O55038 Gm44755-201ENSMUST00000207830 2102 ntBASIC9.6□□□□□ -0.87
Cxcl13O55038 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Cxcl13O55038 Gm7082-201ENSMUST00000209880 969 ntBASIC9.6□□□□□ -0.87
Cxcl13O55038 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC9.6□□□□□ -0.87
Cxcl13O55038 AC122024.3-201ENSMUST00000217719 294 ntBASIC9.6□□□□□ -0.87
Cxcl13O55038 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC9.6□□□□□ -0.87
Cxcl13O55038 CT030653.1-201ENSMUST00000224382 1279 ntBASIC9.6□□□□□ -0.87
Cxcl13O55038 AC154184.3-201ENSMUST00000225620 1090 ntBASIC9.6□□□□□ -0.87
Cxcl13O55038 AC159002.1-201ENSMUST00000226714 924 ntBASIC9.6□□□□□ -0.87
Cxcl13O55038 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Cxcl13O55038 Gm16380-201ENSMUST00000077997 478 ntBASIC9.6□□□□□ -0.87
Cxcl13O55038 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cxcl13O55038 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cxcl13O55038 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cxcl13O55038 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Cxcl13O55038 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC9.6□□□□□ -0.87
Cxcl13O55038 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Cxcl13O55038 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Cxcl13O55038 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cxcl13O55038 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cxcl13O55038 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC9.6□□□□□ -0.87
Cxcl13O55038 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
Cxcl13O55038 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC9.6□□□□□ -0.87
Cxcl13O55038 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC9.6□□□□□ -0.87
Cxcl13O55038 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC9.6□□□□□ -0.87
Cxcl13O55038 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cxcl13O55038 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Cxcl13O55038 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC9.59□□□□□ -0.87
Cxcl13O55038 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Cxcl13O55038 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cxcl13O55038 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cxcl13O55038 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Cxcl13O55038 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
Cxcl13O55038 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cxcl13O55038 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cxcl13O55038 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC9.59□□□□□ -0.87
Cxcl13O55038 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cxcl13O55038 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cxcl13O55038 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC9.59□□□□□ -0.87
Cxcl13O55038 AC124397.2-201ENSMUST00000225575 2215 ntBASIC9.59□□□□□ -0.87
Cxcl13O55038 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cxcl13O55038 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cxcl13O55038 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cxcl13O55038 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cxcl13O55038 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC9.59□□□□□ -0.87
Cxcl13O55038 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cxcl13O55038 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cxcl13O55038 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cxcl13O55038 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Cxcl13O55038 Mir453-201ENSMUST00000104732 82 ntBASIC9.59□□□□□ -0.87
Cxcl13O55038 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC9.59□□□□□ -0.87
Cxcl13O55038 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
Cxcl13O55038 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC9.59□□□□□ -0.87
Cxcl13O55038 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC9.59□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms