Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Gm42867-201ENSMUST00000202995 469 ntBASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Gm5996-201ENSMUST00000211110 718 ntBASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Gm18212-201ENSMUST00000211678 889 ntBASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Tnfrsf11bO08712 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Gm37600-201ENSMUST00000193764 3292 ntBASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Gm15566-201ENSMUST00000121130 590 ntBASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Gm2260-201ENSMUST00000184965 657 ntBASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Gm4857-201ENSMUST00000192718 785 ntBASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Gm7504-201ENSMUST00000201449 424 ntBASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Gm8342-201ENSMUST00000209839 757 ntBASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Gm33366-201ENSMUST00000195583 3827 ntBASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Tnfrsf11bO08712 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf11bO08712 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf11bO08712 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf11bO08712 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Tnfrsf11bO08712 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf11bO08712 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Tnfrsf11bO08712 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Tnfrsf11bO08712 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf11bO08712 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf11bO08712 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf11bO08712 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf11bO08712 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf11bO08712 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.49□□□□□ -0.57
Tnfrsf11bO08712 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Tnfrsf11bO08712 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Tnfrsf11bO08712 Gm15329-201ENSMUST00000121408 155 ntBASIC11.49□□□□□ -0.57
Tnfrsf11bO08712 Gm15549-201ENSMUST00000121595 622 ntBASIC11.49□□□□□ -0.57
Tnfrsf11bO08712 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf11bO08712 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.49□□□□□ -0.57
Tnfrsf11bO08712 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf11bO08712 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Tnfrsf11bO08712 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC11.49□□□□□ -0.57
Tnfrsf11bO08712 Gm27552-201ENSMUST00000183351 62 ntBASIC11.49□□□□□ -0.57
Tnfrsf11bO08712 Gm27844-201ENSMUST00000183613 62 ntBASIC11.49□□□□□ -0.57
Tnfrsf11bO08712 Gm9540-201ENSMUST00000188230 478 ntBASIC11.49□□□□□ -0.57
Tnfrsf11bO08712 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.49□□□□□ -0.57
Tnfrsf11bO08712 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC11.49□□□□□ -0.57
Tnfrsf11bO08712 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.49□□□□□ -0.57
Tnfrsf11bO08712 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Tnfrsf11bO08712 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms