Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc180J3QNE4 Has2os-202ENSMUST00000163314 633 ntTSL 3 BASIC20.45■□□□□ 0.86
Ccdc180J3QNE4 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC20.45■□□□□ 0.86
Ccdc180J3QNE4 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc180J3QNE4 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc180J3QNE4 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc180J3QNE4 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc180J3QNE4 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Ccdc180J3QNE4 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc180J3QNE4 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Ccdc180J3QNE4 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC20.45■□□□□ 0.86
Ccdc180J3QNE4 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC20.45■□□□□ 0.86
Ccdc180J3QNE4 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc180J3QNE4 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc180J3QNE4 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc180J3QNE4 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc180J3QNE4 AC090962.2-201ENSMUST00000225064 1801 ntBASIC20.45■□□□□ 0.86
Ccdc180J3QNE4 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Ccdc180J3QNE4 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC20.45■□□□□ 0.86
Ccdc180J3QNE4 Gm14052-201ENSMUST00000121434 1031 ntBASIC20.45■□□□□ 0.86
Ccdc180J3QNE4 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC20.45■□□□□ 0.86
Ccdc180J3QNE4 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc180J3QNE4 Nkain2-205ENSMUST00000219125 1166 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc180J3QNE4 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc180J3QNE4 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccdc180J3QNE4 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Ccdc180J3QNE4 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc180J3QNE4 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc180J3QNE4 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc180J3QNE4 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc180J3QNE4 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc180J3QNE4 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc180J3QNE4 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc180J3QNE4 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
Ccdc180J3QNE4 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc180J3QNE4 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc180J3QNE4 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Ccdc180J3QNE4 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC20.44■□□□□ 0.86
Ccdc180J3QNE4 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc180J3QNE4 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc180J3QNE4 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Ccdc180J3QNE4 Gm15625-201ENSMUST00000117617 1093 ntBASIC20.44■□□□□ 0.86
Ccdc180J3QNE4 Gm24078-201ENSMUST00000158184 103 ntBASIC20.44■□□□□ 0.86
Ccdc180J3QNE4 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC20.44■□□□□ 0.86
Ccdc180J3QNE4 Gm19918-201ENSMUST00000194858 400 ntBASIC20.44■□□□□ 0.86
Ccdc180J3QNE4 Gm43667-201ENSMUST00000198616 1095 ntBASIC20.44■□□□□ 0.86
Ccdc180J3QNE4 Gm10020-201ENSMUST00000081993 612 ntBASIC20.44■□□□□ 0.86
Ccdc180J3QNE4 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Ccdc180J3QNE4 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc180J3QNE4 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC20.44■□□□□ 0.86
Ccdc180J3QNE4 Gm42829-201ENSMUST00000198417 2585 ntBASIC20.44■□□□□ 0.86
Ccdc180J3QNE4 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc180J3QNE4 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ccdc180J3QNE4 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc180J3QNE4 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc180J3QNE4 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Ccdc180J3QNE4 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc180J3QNE4 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc180J3QNE4 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc180J3QNE4 Gm6441-201ENSMUST00000120983 696 ntBASIC20.43■□□□□ 0.86
Ccdc180J3QNE4 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC20.43■□□□□ 0.86
Ccdc180J3QNE4 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC20.43■□□□□ 0.86
Ccdc180J3QNE4 Gm27826-201ENSMUST00000175282 255 ntBASIC20.43■□□□□ 0.86
Ccdc180J3QNE4 Gm45258-201ENSMUST00000210042 853 ntBASIC20.43■□□□□ 0.86
Ccdc180J3QNE4 Gm9204-201ENSMUST00000212641 947 ntBASIC20.43■□□□□ 0.86
Ccdc180J3QNE4 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc180J3QNE4 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc180J3QNE4 Gm43972-201ENSMUST00000181398 1467 ntBASIC20.43■□□□□ 0.86
Ccdc180J3QNE4 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc180J3QNE4 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc180J3QNE4 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Ccdc180J3QNE4 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC20.43■□□□□ 0.86
Ccdc180J3QNE4 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC20.43■□□□□ 0.86
Ccdc180J3QNE4 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC20.43■□□□□ 0.86
Ccdc180J3QNE4 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ccdc180J3QNE4 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Ccdc180J3QNE4 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Ccdc180J3QNE4 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc180J3QNE4 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc180J3QNE4 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC20.42■□□□□ 0.86
Ccdc180J3QNE4 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc180J3QNE4 Gm43244-201ENSMUST00000196994 1285 ntBASIC20.42■□□□□ 0.86
Ccdc180J3QNE4 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC20.42■□□□□ 0.86
Ccdc180J3QNE4 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Ccdc180J3QNE4 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc180J3QNE4 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc180J3QNE4 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc180J3QNE4 Gm7405-201ENSMUST00000121476 1337 ntBASIC20.42■□□□□ 0.86
Ccdc180J3QNE4 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc180J3QNE4 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc180J3QNE4 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc180J3QNE4 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc180J3QNE4 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc180J3QNE4 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc180J3QNE4 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Ccdc180J3QNE4 Gm5122-202ENSMUST00000216854 1637 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc180J3QNE4 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc180J3QNE4 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Ccdc180J3QNE4 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccdc180J3QNE4 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms