Protein–RNA interactions for Protein: E9PX29

Sptbn4, Spectrin beta chain, mousemouse

Predictions only

Length 2,561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4E9PX29 Gm28424-201ENSMUST00000187393 1319 ntBASIC10.17□□□□□ -0.78
Sptbn4E9PX29 AC116596.1-201ENSMUST00000228112 1762 ntBASIC10.17□□□□□ -0.78
Sptbn4E9PX29 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sptbn4E9PX29 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sptbn4E9PX29 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sptbn4E9PX29 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sptbn4E9PX29 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sptbn4E9PX29 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sptbn4E9PX29 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC10.17□□□□□ -0.78
Sptbn4E9PX29 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sptbn4E9PX29 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC10.17□□□□□ -0.78
Sptbn4E9PX29 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC10.17□□□□□ -0.78
Sptbn4E9PX29 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sptbn4E9PX29 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sptbn4E9PX29 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sptbn4E9PX29 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sptbn4E9PX29 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.17□□□□□ -0.78
Sptbn4E9PX29 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sptbn4E9PX29 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sptbn4E9PX29 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.17□□□□□ -0.78
Sptbn4E9PX29 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sptbn4E9PX29 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC10.17□□□□□ -0.78
Sptbn4E9PX29 Gm45110-201ENSMUST00000205704 1402 ntBASIC10.17□□□□□ -0.78
Sptbn4E9PX29 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC10.17□□□□□ -0.78
Sptbn4E9PX29 Plekha7-206ENSMUST00000182487 3476 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Sptbn4E9PX29 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Sptbn4E9PX29 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sptbn4E9PX29 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sptbn4E9PX29 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC10.17□□□□□ -0.78
Sptbn4E9PX29 Gm25288-201ENSMUST00000122800 265 ntBASIC10.17□□□□□ -0.78
Sptbn4E9PX29 Gm19246-201ENSMUST00000173599 255 ntBASIC10.17□□□□□ -0.78
Sptbn4E9PX29 Gm10238-201ENSMUST00000089689 408 ntBASIC10.17□□□□□ -0.78
Sptbn4E9PX29 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Sptbn4E9PX29 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Sptbn4E9PX29 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sptbn4E9PX29 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Sptbn4E9PX29 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Sptbn4E9PX29 Gm37160-201ENSMUST00000193081 1689 ntBASIC10.17□□□□□ -0.78
Sptbn4E9PX29 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Ube2l3-203ENSMUST00000115700 571 ntTSL 5 BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Gm18859-201ENSMUST00000118792 825 ntBASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Gm13543-201ENSMUST00000121230 796 ntBASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Cfap100-202ENSMUST00000127508 417 ntTSL 2 BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Gm7456-201ENSMUST00000182862 1011 ntBASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Gm18030-201ENSMUST00000222163 731 ntBASIC10.16□□□□□ -0.78
Sptbn4E9PX29 BC048562-201ENSMUST00000057265 690 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Gm15599-201ENSMUST00000122283 1345 ntBASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Gm9409-201ENSMUST00000197017 316 ntBASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Gm45745-201ENSMUST00000211447 1180 ntBASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Polr2k-201ENSMUST00000057177 601 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Sptbn4E9PX29 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC10.15□□□□□ -0.78
Sptbn4E9PX29 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Sptbn4E9PX29 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sptbn4E9PX29 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sptbn4E9PX29 Bcl2-202ENSMUST00000189999 2841 ntBASIC10.15□□□□□ -0.78
Sptbn4E9PX29 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Sptbn4E9PX29 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sptbn4E9PX29 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sptbn4E9PX29 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Sptbn4E9PX29 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms