Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Hfm1D3Z4R1 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hfm1D3Z4R1 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hfm1D3Z4R1 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Hfm1D3Z4R1 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hfm1D3Z4R1 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC15.73■□□□□ 0.11
Hfm1D3Z4R1 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hfm1D3Z4R1 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
Hfm1D3Z4R1 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Hfm1D3Z4R1 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hfm1D3Z4R1 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hfm1D3Z4R1 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hfm1D3Z4R1 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hfm1D3Z4R1 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hfm1D3Z4R1 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC15.73■□□□□ 0.11
Hfm1D3Z4R1 Gm16441-201ENSMUST00000138176 924 ntBASIC15.73■□□□□ 0.11
Hfm1D3Z4R1 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC15.73■□□□□ 0.11
Hfm1D3Z4R1 Gm6038-201ENSMUST00000154310 948 ntBASIC15.73■□□□□ 0.11
Hfm1D3Z4R1 Gm9574-201ENSMUST00000173127 845 ntBASIC15.73■□□□□ 0.11
Hfm1D3Z4R1 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC15.73■□□□□ 0.11
Hfm1D3Z4R1 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC15.73■□□□□ 0.11
Hfm1D3Z4R1 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Hfm1D3Z4R1 Thy1-205ENSMUST00000215156 460 ntTSL 5 BASIC15.73■□□□□ 0.11
Hfm1D3Z4R1 AC133496.1-201ENSMUST00000223891 743 ntBASIC15.73■□□□□ 0.11
Hfm1D3Z4R1 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hfm1D3Z4R1 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hfm1D3Z4R1 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hfm1D3Z4R1 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hfm1D3Z4R1 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hfm1D3Z4R1 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hfm1D3Z4R1 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hfm1D3Z4R1 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hfm1D3Z4R1 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hfm1D3Z4R1 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hfm1D3Z4R1 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hfm1D3Z4R1 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Hfm1D3Z4R1 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Hfm1D3Z4R1 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hfm1D3Z4R1 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hfm1D3Z4R1 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Eif3d-201ENSMUST00000100484 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Gm15976-201ENSMUST00000129701 429 ntTSL 3 BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Gm4778-202ENSMUST00000159517 1241 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Gm4868-201ENSMUST00000164138 789 ntBASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Gm17782-201ENSMUST00000174345 880 ntBASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Gm20703-201ENSMUST00000175668 385 ntTSL 2 BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Gm20694-201ENSMUST00000176943 404 ntBASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Gm28342-201ENSMUST00000190308 589 ntTSL 3 BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Mt1-203ENSMUST00000212291 633 ntTSL 2 BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 AC154585.1-201ENSMUST00000218917 997 ntBASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hfm1D3Z4R1 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hfm1D3Z4R1 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hfm1D3Z4R1 AC153524.2-202ENSMUST00000220401 1794 ntBASIC15.71■□□□□ 0.11
Hfm1D3Z4R1 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Hfm1D3Z4R1 Epha6-203ENSMUST00000161358 1356 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hfm1D3Z4R1 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hfm1D3Z4R1 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hfm1D3Z4R1 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hfm1D3Z4R1 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Hfm1D3Z4R1 Gm42971-201ENSMUST00000199228 2079 ntBASIC15.71■□□□□ 0.11
Hfm1D3Z4R1 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hfm1D3Z4R1 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hfm1D3Z4R1 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hfm1D3Z4R1 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC15.71■□□□□ 0.11
Hfm1D3Z4R1 Gm12345-201ENSMUST00000119288 898 ntBASIC15.71■□□□□ 0.11
Hfm1D3Z4R1 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms