Protein–RNA interactions for Protein: Q9Z2A0

Pdpk1, 3-phosphoinositide-dependent protein kinase 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdpk1Q9Z2A0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pdpk1Q9Z2A0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pdpk1Q9Z2A0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.53■□□□□ 0.88
Pdpk1Q9Z2A0 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pdpk1Q9Z2A0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pdpk1Q9Z2A0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pdpk1Q9Z2A0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pdpk1Q9Z2A0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Pdpk1Q9Z2A0 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.52■□□□□ 0.88
Pdpk1Q9Z2A0 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pdpk1Q9Z2A0 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pdpk1Q9Z2A0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pdpk1Q9Z2A0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.52■□□□□ 0.88
Pdpk1Q9Z2A0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pdpk1Q9Z2A0 Iqck-206ENSMUST00000208658 2891 ntBASIC20.52■□□□□ 0.88
Pdpk1Q9Z2A0 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pdpk1Q9Z2A0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Pdpk1Q9Z2A0 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Pdpk1Q9Z2A0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Pdpk1Q9Z2A0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pdpk1Q9Z2A0 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.51■□□□□ 0.87
Pdpk1Q9Z2A0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pdpk1Q9Z2A0 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.51■□□□□ 0.87
Pdpk1Q9Z2A0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Pdpk1Q9Z2A0 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pdpk1Q9Z2A0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Pdpk1Q9Z2A0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pdpk1Q9Z2A0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Pdpk1Q9Z2A0 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.5■□□□□ 0.87
Pdpk1Q9Z2A0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pdpk1Q9Z2A0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pdpk1Q9Z2A0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pdpk1Q9Z2A0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pdpk1Q9Z2A0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Pdpk1Q9Z2A0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pdpk1Q9Z2A0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Pdpk1Q9Z2A0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pdpk1Q9Z2A0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Pdpk1Q9Z2A0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Pdpk1Q9Z2A0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pdpk1Q9Z2A0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Pdpk1Q9Z2A0 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.48■□□□□ 0.87
Pdpk1Q9Z2A0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Pdpk1Q9Z2A0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Pdpk1Q9Z2A0 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pdpk1Q9Z2A0 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pdpk1Q9Z2A0 Gm22238-201ENSMUST00000175222 88 ntBASIC20.48■□□□□ 0.87
Pdpk1Q9Z2A0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pdpk1Q9Z2A0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Pdpk1Q9Z2A0 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pdpk1Q9Z2A0 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pdpk1Q9Z2A0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pdpk1Q9Z2A0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Pdpk1Q9Z2A0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pdpk1Q9Z2A0 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pdpk1Q9Z2A0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pdpk1Q9Z2A0 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Pdpk1Q9Z2A0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pdpk1Q9Z2A0 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pdpk1Q9Z2A0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pdpk1Q9Z2A0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
Pdpk1Q9Z2A0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pdpk1Q9Z2A0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.47■□□□□ 0.87
Pdpk1Q9Z2A0 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.47■□□□□ 0.87
Pdpk1Q9Z2A0 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pdpk1Q9Z2A0 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Pdpk1Q9Z2A0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pdpk1Q9Z2A0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pdpk1Q9Z2A0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Pdpk1Q9Z2A0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pdpk1Q9Z2A0 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pdpk1Q9Z2A0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pdpk1Q9Z2A0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pdpk1Q9Z2A0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pdpk1Q9Z2A0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pdpk1Q9Z2A0 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.87
Pdpk1Q9Z2A0 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdpk1Q9Z2A0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdpk1Q9Z2A0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdpk1Q9Z2A0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pdpk1Q9Z2A0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdpk1Q9Z2A0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdpk1Q9Z2A0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.45■□□□□ 0.86
Pdpk1Q9Z2A0 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Pdpk1Q9Z2A0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.45■□□□□ 0.86
Pdpk1Q9Z2A0 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.45■□□□□ 0.86
Pdpk1Q9Z2A0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdpk1Q9Z2A0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Pdpk1Q9Z2A0 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdpk1Q9Z2A0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pdpk1Q9Z2A0 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdpk1Q9Z2A0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pdpk1Q9Z2A0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdpk1Q9Z2A0 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pdpk1Q9Z2A0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.44■□□□□ 0.86
Pdpk1Q9Z2A0 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.44■□□□□ 0.86
Pdpk1Q9Z2A0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Pdpk1Q9Z2A0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pdpk1Q9Z2A0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.44■□□□□ 0.86
Pdpk1Q9Z2A0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms