Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcf1Q9QZM3 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Clcf1Q9QZM3 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcf1Q9QZM3 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.37■□□□□ 0.53
Clcf1Q9QZM3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Clcf1Q9QZM3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Clcf1Q9QZM3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Clcf1Q9QZM3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Clcf1Q9QZM3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcf1Q9QZM3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Clcf1Q9QZM3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Clcf1Q9QZM3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Clcf1Q9QZM3 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.35■□□□□ 0.53
Clcf1Q9QZM3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Clcf1Q9QZM3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcf1Q9QZM3 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcf1Q9QZM3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcf1Q9QZM3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcf1Q9QZM3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.35■□□□□ 0.53
Clcf1Q9QZM3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.35■□□□□ 0.53
Clcf1Q9QZM3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Clcf1Q9QZM3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcf1Q9QZM3 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Clcf1Q9QZM3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcf1Q9QZM3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.35■□□□□ 0.53
Clcf1Q9QZM3 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.35■□□□□ 0.53
Clcf1Q9QZM3 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcf1Q9QZM3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Clcf1Q9QZM3 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.34■□□□□ 0.53
Clcf1Q9QZM3 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.34■□□□□ 0.53
Clcf1Q9QZM3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.34■□□□□ 0.53
Clcf1Q9QZM3 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clcf1Q9QZM3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clcf1Q9QZM3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Clcf1Q9QZM3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Clcf1Q9QZM3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.34■□□□□ 0.53
Clcf1Q9QZM3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clcf1Q9QZM3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Clcf1Q9QZM3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clcf1Q9QZM3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Clcf1Q9QZM3 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.33■□□□□ 0.52
Clcf1Q9QZM3 Gm9870-201ENSMUST00000063874 645 ntBASIC18.33■□□□□ 0.52
Clcf1Q9QZM3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Clcf1Q9QZM3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Clcf1Q9QZM3 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.33■□□□□ 0.52
Clcf1Q9QZM3 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcf1Q9QZM3 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Clcf1Q9QZM3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Clcf1Q9QZM3 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcf1Q9QZM3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcf1Q9QZM3 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcf1Q9QZM3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcf1Q9QZM3 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcf1Q9QZM3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Clcf1Q9QZM3 Notumos-201ENSMUST00000151998 2659 ntBASIC18.31■□□□□ 0.52
Clcf1Q9QZM3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcf1Q9QZM3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Clcf1Q9QZM3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Clcf1Q9QZM3 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcf1Q9QZM3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Clcf1Q9QZM3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Clcf1Q9QZM3 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Clcf1Q9QZM3 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcf1Q9QZM3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Clcf1Q9QZM3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Clcf1Q9QZM3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcf1Q9QZM3 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Clcf1Q9QZM3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Clcf1Q9QZM3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Clcf1Q9QZM3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clcf1Q9QZM3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Clcf1Q9QZM3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clcf1Q9QZM3 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Clcf1Q9QZM3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.29■□□□□ 0.52
Clcf1Q9QZM3 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Clcf1Q9QZM3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Clcf1Q9QZM3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Clcf1Q9QZM3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcf1Q9QZM3 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.28■□□□□ 0.52
Clcf1Q9QZM3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Clcf1Q9QZM3 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Clcf1Q9QZM3 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcf1Q9QZM3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Clcf1Q9QZM3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Clcf1Q9QZM3 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Clcf1Q9QZM3 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Clcf1Q9QZM3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Clcf1Q9QZM3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Clcf1Q9QZM3 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Clcf1Q9QZM3 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.26■□□□□ 0.51
Clcf1Q9QZM3 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clcf1Q9QZM3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clcf1Q9QZM3 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clcf1Q9QZM3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Clcf1Q9QZM3 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Clcf1Q9QZM3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.26■□□□□ 0.51
Clcf1Q9QZM3 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Clcf1Q9QZM3 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.26■□□□□ 0.51
Clcf1Q9QZM3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.26■□□□□ 0.51
Clcf1Q9QZM3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms