Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shroom3Q9QXN0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Shroom3Q9QXN0 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shroom3Q9QXN0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shroom3Q9QXN0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Shroom3Q9QXN0 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shroom3Q9QXN0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Shroom3Q9QXN0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shroom3Q9QXN0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Shroom3Q9QXN0 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.44■□□□□ 0.86
Shroom3Q9QXN0 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Shroom3Q9QXN0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shroom3Q9QXN0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shroom3Q9QXN0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shroom3Q9QXN0 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.43■□□□□ 0.86
Shroom3Q9QXN0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Shroom3Q9QXN0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shroom3Q9QXN0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Shroom3Q9QXN0 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shroom3Q9QXN0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shroom3Q9QXN0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shroom3Q9QXN0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.43■□□□□ 0.86
Shroom3Q9QXN0 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.43■□□□□ 0.86
Shroom3Q9QXN0 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shroom3Q9QXN0 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.43■□□□□ 0.86
Shroom3Q9QXN0 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shroom3Q9QXN0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Shroom3Q9QXN0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Shroom3Q9QXN0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shroom3Q9QXN0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shroom3Q9QXN0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shroom3Q9QXN0 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shroom3Q9QXN0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shroom3Q9QXN0 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shroom3Q9QXN0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Shroom3Q9QXN0 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Shroom3Q9QXN0 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shroom3Q9QXN0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
Shroom3Q9QXN0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shroom3Q9QXN0 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Shroom3Q9QXN0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Shroom3Q9QXN0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shroom3Q9QXN0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shroom3Q9QXN0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Shroom3Q9QXN0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shroom3Q9QXN0 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.41■□□□□ 0.86
Shroom3Q9QXN0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shroom3Q9QXN0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shroom3Q9QXN0 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shroom3Q9QXN0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shroom3Q9QXN0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shroom3Q9QXN0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shroom3Q9QXN0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Shroom3Q9QXN0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shroom3Q9QXN0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Shroom3Q9QXN0 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Shroom3Q9QXN0 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.41■□□□□ 0.86
Shroom3Q9QXN0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shroom3Q9QXN0 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shroom3Q9QXN0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shroom3Q9QXN0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Shroom3Q9QXN0 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shroom3Q9QXN0 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Shroom3Q9QXN0 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.4■□□□□ 0.86
Shroom3Q9QXN0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Shroom3Q9QXN0 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.39■□□□□ 0.86
Shroom3Q9QXN0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Shroom3Q9QXN0 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Shroom3Q9QXN0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Shroom3Q9QXN0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Shroom3Q9QXN0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Shroom3Q9QXN0 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Shroom3Q9QXN0 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Shroom3Q9QXN0 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Shroom3Q9QXN0 Gm7143-201ENSMUST00000222811 859 ntBASIC20.39■□□□□ 0.85
Shroom3Q9QXN0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Shroom3Q9QXN0 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Shroom3Q9QXN0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Shroom3Q9QXN0 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Shroom3Q9QXN0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Shroom3Q9QXN0 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Shroom3Q9QXN0 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.38■□□□□ 0.85
Shroom3Q9QXN0 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Shroom3Q9QXN0 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Shroom3Q9QXN0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Shroom3Q9QXN0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shroom3Q9QXN0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.37■□□□□ 0.85
Shroom3Q9QXN0 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Shroom3Q9QXN0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shroom3Q9QXN0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Shroom3Q9QXN0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shroom3Q9QXN0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shroom3Q9QXN0 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Shroom3Q9QXN0 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.37■□□□□ 0.85
Shroom3Q9QXN0 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shroom3Q9QXN0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shroom3Q9QXN0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shroom3Q9QXN0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shroom3Q9QXN0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Shroom3Q9QXN0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms