Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rbfox1Q9JJ43 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rbfox1Q9JJ43 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rbfox1Q9JJ43 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rbfox1Q9JJ43 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rbfox1Q9JJ43 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rbfox1Q9JJ43 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rbfox1Q9JJ43 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rbfox1Q9JJ43 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rbfox1Q9JJ43 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rbfox1Q9JJ43 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rbfox1Q9JJ43 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.3■□□□□ 0.36
Rbfox1Q9JJ43 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rbfox1Q9JJ43 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rbfox1Q9JJ43 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.3■□□□□ 0.36
Rbfox1Q9JJ43 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.3■□□□□ 0.36
Rbfox1Q9JJ43 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rbfox1Q9JJ43 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.3■□□□□ 0.36
Rbfox1Q9JJ43 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rbfox1Q9JJ43 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rbfox1Q9JJ43 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rbfox1Q9JJ43 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rbfox1Q9JJ43 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Rbfox1Q9JJ43 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rbfox1Q9JJ43 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rbfox1Q9JJ43 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rbfox1Q9JJ43 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rbfox1Q9JJ43 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rbfox1Q9JJ43 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Rbfox1Q9JJ43 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rbfox1Q9JJ43 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rbfox1Q9JJ43 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rbfox1Q9JJ43 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rbfox1Q9JJ43 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.28■□□□□ 0.36
Rbfox1Q9JJ43 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rbfox1Q9JJ43 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rbfox1Q9JJ43 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rbfox1Q9JJ43 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rbfox1Q9JJ43 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rbfox1Q9JJ43 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Rbfox1Q9JJ43 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rbfox1Q9JJ43 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rbfox1Q9JJ43 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rbfox1Q9JJ43 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rbfox1Q9JJ43 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.28■□□□□ 0.36
Rbfox1Q9JJ43 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rbfox1Q9JJ43 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Rbfox1Q9JJ43 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rbfox1Q9JJ43 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rbfox1Q9JJ43 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rbfox1Q9JJ43 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rbfox1Q9JJ43 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rbfox1Q9JJ43 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Rbfox1Q9JJ43 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.27■□□□□ 0.36
Rbfox1Q9JJ43 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rbfox1Q9JJ43 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Rbfox1Q9JJ43 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Rbfox1Q9JJ43 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Rbfox1Q9JJ43 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rbfox1Q9JJ43 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rbfox1Q9JJ43 Gm10399-202ENSMUST00000202768 748 ntBASIC17.26■□□□□ 0.35
Rbfox1Q9JJ43 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rbfox1Q9JJ43 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.26■□□□□ 0.35
Rbfox1Q9JJ43 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rbfox1Q9JJ43 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rbfox1Q9JJ43 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rbfox1Q9JJ43 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rbfox1Q9JJ43 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rbfox1Q9JJ43 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.25■□□□□ 0.35
Rbfox1Q9JJ43 Gm43566-201ENSMUST00000196851 808 ntBASIC17.25■□□□□ 0.35
Rbfox1Q9JJ43 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.25■□□□□ 0.35
Rbfox1Q9JJ43 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rbfox1Q9JJ43 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rbfox1Q9JJ43 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Rbfox1Q9JJ43 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rbfox1Q9JJ43 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rbfox1Q9JJ43 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.24■□□□□ 0.35
Rbfox1Q9JJ43 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rbfox1Q9JJ43 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rbfox1Q9JJ43 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rbfox1Q9JJ43 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
Rbfox1Q9JJ43 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.24■□□□□ 0.35
Rbfox1Q9JJ43 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.24■□□□□ 0.35
Rbfox1Q9JJ43 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.24■□□□□ 0.35
Rbfox1Q9JJ43 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.24■□□□□ 0.35
Rbfox1Q9JJ43 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rbfox1Q9JJ43 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rbfox1Q9JJ43 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rbfox1Q9JJ43 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rbfox1Q9JJ43 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rbfox1Q9JJ43 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rbfox1Q9JJ43 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rbfox1Q9JJ43 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rbfox1Q9JJ43 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rbfox1Q9JJ43 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rbfox1Q9JJ43 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rbfox1Q9JJ43 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rbfox1Q9JJ43 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Rbfox1Q9JJ43 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rbfox1Q9JJ43 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms