Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ClpxQ9JHS4 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ClpxQ9JHS4 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ClpxQ9JHS4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
ClpxQ9JHS4 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ClpxQ9JHS4 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ClpxQ9JHS4 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ClpxQ9JHS4 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
ClpxQ9JHS4 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ClpxQ9JHS4 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.46■□□□□ 0.55
ClpxQ9JHS4 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ClpxQ9JHS4 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
ClpxQ9JHS4 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ClpxQ9JHS4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
ClpxQ9JHS4 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
ClpxQ9JHS4 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ClpxQ9JHS4 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ClpxQ9JHS4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.45■□□□□ 0.54
ClpxQ9JHS4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ClpxQ9JHS4 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
ClpxQ9JHS4 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
ClpxQ9JHS4 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
ClpxQ9JHS4 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ClpxQ9JHS4 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ClpxQ9JHS4 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
ClpxQ9JHS4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ClpxQ9JHS4 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ClpxQ9JHS4 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ClpxQ9JHS4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ClpxQ9JHS4 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ClpxQ9JHS4 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.44■□□□□ 0.54
ClpxQ9JHS4 Gm45444-201ENSMUST00000211394 898 ntBASIC18.44■□□□□ 0.54
ClpxQ9JHS4 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
ClpxQ9JHS4 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
ClpxQ9JHS4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ClpxQ9JHS4 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ClpxQ9JHS4 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ClpxQ9JHS4 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
ClpxQ9JHS4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ClpxQ9JHS4 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ClpxQ9JHS4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
ClpxQ9JHS4 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ClpxQ9JHS4 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ClpxQ9JHS4 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ClpxQ9JHS4 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.43■□□□□ 0.54
ClpxQ9JHS4 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ClpxQ9JHS4 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ClpxQ9JHS4 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ClpxQ9JHS4 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
ClpxQ9JHS4 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.42■□□□□ 0.54
ClpxQ9JHS4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ClpxQ9JHS4 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.42■□□□□ 0.54
ClpxQ9JHS4 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.42■□□□□ 0.54
ClpxQ9JHS4 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ClpxQ9JHS4 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ClpxQ9JHS4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
ClpxQ9JHS4 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
ClpxQ9JHS4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
ClpxQ9JHS4 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.41■□□□□ 0.54
ClpxQ9JHS4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ClpxQ9JHS4 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ClpxQ9JHS4 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
ClpxQ9JHS4 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.41■□□□□ 0.54
ClpxQ9JHS4 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.41■□□□□ 0.54
ClpxQ9JHS4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.41■□□□□ 0.54
ClpxQ9JHS4 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.4■□□□□ 0.54
ClpxQ9JHS4 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ClpxQ9JHS4 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ClpxQ9JHS4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ClpxQ9JHS4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ClpxQ9JHS4 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ClpxQ9JHS4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
ClpxQ9JHS4 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.54
ClpxQ9JHS4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
ClpxQ9JHS4 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
ClpxQ9JHS4 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ClpxQ9JHS4 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ClpxQ9JHS4 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ClpxQ9JHS4 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.39■□□□□ 0.53
ClpxQ9JHS4 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ClpxQ9JHS4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ClpxQ9JHS4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ClpxQ9JHS4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.38■□□□□ 0.53
ClpxQ9JHS4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ClpxQ9JHS4 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.38■□□□□ 0.53
ClpxQ9JHS4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ClpxQ9JHS4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
ClpxQ9JHS4 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
ClpxQ9JHS4 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ClpxQ9JHS4 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.38■□□□□ 0.53
ClpxQ9JHS4 Gm43566-201ENSMUST00000196851 808 ntBASIC18.38■□□□□ 0.53
ClpxQ9JHS4 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ClpxQ9JHS4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ClpxQ9JHS4 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ClpxQ9JHS4 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ClpxQ9JHS4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ClpxQ9JHS4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ClpxQ9JHS4 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ClpxQ9JHS4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ClpxQ9JHS4 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms