Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube4bQ9ES00 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube4bQ9ES00 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ube4bQ9ES00 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube4bQ9ES00 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube4bQ9ES00 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ube4bQ9ES00 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube4bQ9ES00 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ube4bQ9ES00 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube4bQ9ES00 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Ube4bQ9ES00 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube4bQ9ES00 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube4bQ9ES00 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ube4bQ9ES00 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.4■□□□□ 0.7
Ube4bQ9ES00 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube4bQ9ES00 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube4bQ9ES00 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ube4bQ9ES00 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.4■□□□□ 0.7
Ube4bQ9ES00 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.4■□□□□ 0.7
Ube4bQ9ES00 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Ube4bQ9ES00 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ube4bQ9ES00 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Ube4bQ9ES00 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Ube4bQ9ES00 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
Ube4bQ9ES00 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube4bQ9ES00 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube4bQ9ES00 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube4bQ9ES00 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ube4bQ9ES00 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Ube4bQ9ES00 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ube4bQ9ES00 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Ube4bQ9ES00 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ube4bQ9ES00 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Ube4bQ9ES00 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.38■□□□□ 0.69
Ube4bQ9ES00 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ube4bQ9ES00 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.38■□□□□ 0.69
Ube4bQ9ES00 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ube4bQ9ES00 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Ube4bQ9ES00 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ube4bQ9ES00 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ube4bQ9ES00 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ube4bQ9ES00 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Ube4bQ9ES00 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Ube4bQ9ES00 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.38■□□□□ 0.69
Ube4bQ9ES00 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ube4bQ9ES00 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ube4bQ9ES00 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ube4bQ9ES00 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ube4bQ9ES00 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ube4bQ9ES00 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ube4bQ9ES00 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Ube4bQ9ES00 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ube4bQ9ES00 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ube4bQ9ES00 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.36■□□□□ 0.69
Ube4bQ9ES00 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ube4bQ9ES00 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ube4bQ9ES00 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.36■□□□□ 0.69
Ube4bQ9ES00 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ube4bQ9ES00 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ube4bQ9ES00 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ube4bQ9ES00 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ube4bQ9ES00 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ube4bQ9ES00 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ube4bQ9ES00 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ube4bQ9ES00 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ube4bQ9ES00 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ube4bQ9ES00 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ube4bQ9ES00 Scarna2-201ENSMUST00000157560 414 ntBASIC19.35■□□□□ 0.69
Ube4bQ9ES00 Gm9806-201ENSMUST00000051080 552 ntBASIC19.35■□□□□ 0.69
Ube4bQ9ES00 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ube4bQ9ES00 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ube4bQ9ES00 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ube4bQ9ES00 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Ube4bQ9ES00 Gm44428-201ENSMUST00000204474 874 ntBASIC19.34■□□□□ 0.69
Ube4bQ9ES00 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ube4bQ9ES00 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.34■□□□□ 0.69
Ube4bQ9ES00 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.34■□□□□ 0.69
Ube4bQ9ES00 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ube4bQ9ES00 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ube4bQ9ES00 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ube4bQ9ES00 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ube4bQ9ES00 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ube4bQ9ES00 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ube4bQ9ES00 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.33■□□□□ 0.68
Ube4bQ9ES00 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ube4bQ9ES00 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ube4bQ9ES00 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ube4bQ9ES00 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube4bQ9ES00 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ube4bQ9ES00 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube4bQ9ES00 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube4bQ9ES00 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.32■□□□□ 0.68
Ube4bQ9ES00 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube4bQ9ES00 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ube4bQ9ES00 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ube4bQ9ES00 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Ube4bQ9ES00 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ube4bQ9ES00 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.31■□□□□ 0.68
Ube4bQ9ES00 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.31■□□□□ 0.68
Ube4bQ9ES00 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms