Protein–RNA interactions for Protein: Q9DC28

Csnk1d, Casein kinase I isoform delta, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1dQ9DC28 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Csnk1dQ9DC28 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Csnk1dQ9DC28 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Csnk1dQ9DC28 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.27■□□□□ 0.84
Csnk1dQ9DC28 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Csnk1dQ9DC28 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Csnk1dQ9DC28 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.27■□□□□ 0.83
Csnk1dQ9DC28 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
Csnk1dQ9DC28 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Csnk1dQ9DC28 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Csnk1dQ9DC28 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Csnk1dQ9DC28 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Csnk1dQ9DC28 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Csnk1dQ9DC28 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Csnk1dQ9DC28 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
Csnk1dQ9DC28 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Csnk1dQ9DC28 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Csnk1dQ9DC28 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.26■□□□□ 0.83
Csnk1dQ9DC28 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.26■□□□□ 0.83
Csnk1dQ9DC28 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Csnk1dQ9DC28 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.26■□□□□ 0.83
Csnk1dQ9DC28 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Csnk1dQ9DC28 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Csnk1dQ9DC28 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Csnk1dQ9DC28 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Csnk1dQ9DC28 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Csnk1dQ9DC28 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Csnk1dQ9DC28 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Csnk1dQ9DC28 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.25■□□□□ 0.83
Csnk1dQ9DC28 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Csnk1dQ9DC28 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Csnk1dQ9DC28 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Csnk1dQ9DC28 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Csnk1dQ9DC28 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Csnk1dQ9DC28 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.24■□□□□ 0.83
Csnk1dQ9DC28 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Csnk1dQ9DC28 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.24■□□□□ 0.83
Csnk1dQ9DC28 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Csnk1dQ9DC28 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.24■□□□□ 0.83
Csnk1dQ9DC28 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Csnk1dQ9DC28 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Csnk1dQ9DC28 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Csnk1dQ9DC28 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Csnk1dQ9DC28 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Csnk1dQ9DC28 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Csnk1dQ9DC28 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.23■□□□□ 0.83
Csnk1dQ9DC28 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Csnk1dQ9DC28 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Csnk1dQ9DC28 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.23■□□□□ 0.83
Csnk1dQ9DC28 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Csnk1dQ9DC28 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Csnk1dQ9DC28 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Csnk1dQ9DC28 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Csnk1dQ9DC28 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Csnk1dQ9DC28 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Csnk1dQ9DC28 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Csnk1dQ9DC28 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Csnk1dQ9DC28 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Csnk1dQ9DC28 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Csnk1dQ9DC28 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.22■□□□□ 0.83
Csnk1dQ9DC28 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Csnk1dQ9DC28 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.21■□□□□ 0.83
Csnk1dQ9DC28 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Csnk1dQ9DC28 Gm27454-201ENSMUST00000185090 204 ntBASIC20.21■□□□□ 0.83
Csnk1dQ9DC28 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
Csnk1dQ9DC28 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Csnk1dQ9DC28 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Csnk1dQ9DC28 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Csnk1dQ9DC28 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Csnk1dQ9DC28 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Csnk1dQ9DC28 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Csnk1dQ9DC28 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Csnk1dQ9DC28 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Csnk1dQ9DC28 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Csnk1dQ9DC28 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Csnk1dQ9DC28 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.2■□□□□ 0.82
Csnk1dQ9DC28 Mir6236-201ENSMUST00000184437 123 ntBASIC20.2■□□□□ 0.82
Csnk1dQ9DC28 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Csnk1dQ9DC28 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Csnk1dQ9DC28 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Csnk1dQ9DC28 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Csnk1dQ9DC28 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Csnk1dQ9DC28 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Csnk1dQ9DC28 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Csnk1dQ9DC28 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Csnk1dQ9DC28 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.19■□□□□ 0.82
Csnk1dQ9DC28 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Csnk1dQ9DC28 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Csnk1dQ9DC28 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.19■□□□□ 0.82
Csnk1dQ9DC28 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Csnk1dQ9DC28 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Csnk1dQ9DC28 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Csnk1dQ9DC28 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Csnk1dQ9DC28 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Csnk1dQ9DC28 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Csnk1dQ9DC28 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Csnk1dQ9DC28 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Csnk1dQ9DC28 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Csnk1dQ9DC28 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Csnk1dQ9DC28 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms