Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.82■□□□□ 0.44
Tmem54Q9D7S1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tmem54Q9D7S1 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmem54Q9D7S1 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmem54Q9D7S1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tmem54Q9D7S1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.82■□□□□ 0.44
Tmem54Q9D7S1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.82■□□□□ 0.44
Tmem54Q9D7S1 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Tmem54Q9D7S1 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmem54Q9D7S1 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmem54Q9D7S1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Tmem54Q9D7S1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmem54Q9D7S1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tmem54Q9D7S1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmem54Q9D7S1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tmem54Q9D7S1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.81■□□□□ 0.44
Tmem54Q9D7S1 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmem54Q9D7S1 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.81■□□□□ 0.44
Tmem54Q9D7S1 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmem54Q9D7S1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmem54Q9D7S1 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmem54Q9D7S1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmem54Q9D7S1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Tmem54Q9D7S1 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Tmem54Q9D7S1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tmem54Q9D7S1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tmem54Q9D7S1 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tmem54Q9D7S1 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Tmem54Q9D7S1 Gm43530-201ENSMUST00000195920 274 ntBASIC17.8■□□□□ 0.44
Tmem54Q9D7S1 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tmem54Q9D7S1 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.8■□□□□ 0.44
Tmem54Q9D7S1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Tmem54Q9D7S1 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Tmem54Q9D7S1 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Tmem54Q9D7S1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.8■□□□□ 0.44
Tmem54Q9D7S1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmem54Q9D7S1 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmem54Q9D7S1 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmem54Q9D7S1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmem54Q9D7S1 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tmem54Q9D7S1 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmem54Q9D7S1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Tmem54Q9D7S1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Tmem54Q9D7S1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Tmem54Q9D7S1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Tmem54Q9D7S1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Tmem54Q9D7S1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tmem54Q9D7S1 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Tmem54Q9D7S1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmem54Q9D7S1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Tmem54Q9D7S1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tmem54Q9D7S1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tmem54Q9D7S1 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Tmem54Q9D7S1 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tmem54Q9D7S1 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tmem54Q9D7S1 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Tmem54Q9D7S1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tmem54Q9D7S1 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Tmem54Q9D7S1 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tmem54Q9D7S1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tmem54Q9D7S1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Tmem54Q9D7S1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Tmem54Q9D7S1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tmem54Q9D7S1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.76■□□□□ 0.43
Tmem54Q9D7S1 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Tmem54Q9D7S1 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Tmem54Q9D7S1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.76■□□□□ 0.43
Tmem54Q9D7S1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tmem54Q9D7S1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tmem54Q9D7S1 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tmem54Q9D7S1 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Tmem54Q9D7S1 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tmem54Q9D7S1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tmem54Q9D7S1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tmem54Q9D7S1 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tmem54Q9D7S1 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tmem54Q9D7S1 Gm13241-201ENSMUST00000094493 780 ntBASIC17.75■□□□□ 0.43
Tmem54Q9D7S1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.75■□□□□ 0.43
Tmem54Q9D7S1 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tmem54Q9D7S1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tmem54Q9D7S1 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tmem54Q9D7S1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tmem54Q9D7S1 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tmem54Q9D7S1 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tmem54Q9D7S1 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tmem54Q9D7S1 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tmem54Q9D7S1 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.74■□□□□ 0.43
Tmem54Q9D7S1 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tmem54Q9D7S1 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tmem54Q9D7S1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tmem54Q9D7S1 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.74■□□□□ 0.43
Tmem54Q9D7S1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Tmem54Q9D7S1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.74■□□□□ 0.43
Tmem54Q9D7S1 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tmem54Q9D7S1 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.74■□□□□ 0.43
Tmem54Q9D7S1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tmem54Q9D7S1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tmem54Q9D7S1 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.73■□□□□ 0.43
Tmem54Q9D7S1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tmem54Q9D7S1 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms