Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps33aQ9D2N9 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps33aQ9D2N9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps33aQ9D2N9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Vps33aQ9D2N9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps33aQ9D2N9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps33aQ9D2N9 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps33aQ9D2N9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps33aQ9D2N9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Vps33aQ9D2N9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Vps33aQ9D2N9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vps33aQ9D2N9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vps33aQ9D2N9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Vps33aQ9D2N9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vps33aQ9D2N9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.56■■□□□ 1.04
Vps33aQ9D2N9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vps33aQ9D2N9 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.56■■□□□ 1.04
Vps33aQ9D2N9 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Vps33aQ9D2N9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vps33aQ9D2N9 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Vps33aQ9D2N9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vps33aQ9D2N9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vps33aQ9D2N9 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vps33aQ9D2N9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Vps33aQ9D2N9 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vps33aQ9D2N9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Vps33aQ9D2N9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vps33aQ9D2N9 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vps33aQ9D2N9 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Vps33aQ9D2N9 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.55■■□□□ 1.04
Vps33aQ9D2N9 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.55■■□□□ 1.04
Vps33aQ9D2N9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vps33aQ9D2N9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Vps33aQ9D2N9 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vps33aQ9D2N9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vps33aQ9D2N9 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vps33aQ9D2N9 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Vps33aQ9D2N9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Vps33aQ9D2N9 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vps33aQ9D2N9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vps33aQ9D2N9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.54■■□□□ 1.04
Vps33aQ9D2N9 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Vps33aQ9D2N9 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Vps33aQ9D2N9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Vps33aQ9D2N9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.53■■□□□ 1.04
Vps33aQ9D2N9 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Vps33aQ9D2N9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC21.53■■□□□ 1.04
Vps33aQ9D2N9 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vps33aQ9D2N9 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.53■■□□□ 1.04
Vps33aQ9D2N9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vps33aQ9D2N9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Vps33aQ9D2N9 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Vps33aQ9D2N9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps33aQ9D2N9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps33aQ9D2N9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps33aQ9D2N9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps33aQ9D2N9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
Vps33aQ9D2N9 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Vps33aQ9D2N9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Vps33aQ9D2N9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
Vps33aQ9D2N9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vps33aQ9D2N9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Vps33aQ9D2N9 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
Vps33aQ9D2N9 Gm7432-201ENSMUST00000210343 879 ntBASIC21.51■■□□□ 1.03
Vps33aQ9D2N9 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC21.51■■□□□ 1.03
Vps33aQ9D2N9 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Vps33aQ9D2N9 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
Vps33aQ9D2N9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.51■■□□□ 1.03
Vps33aQ9D2N9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC21.51■■□□□ 1.03
Vps33aQ9D2N9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vps33aQ9D2N9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.51■■□□□ 1.03
Vps33aQ9D2N9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Vps33aQ9D2N9 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.5■■□□□ 1.03
Vps33aQ9D2N9 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Vps33aQ9D2N9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
Vps33aQ9D2N9 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Vps33aQ9D2N9 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Vps33aQ9D2N9 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vps33aQ9D2N9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Vps33aQ9D2N9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Vps33aQ9D2N9 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.48■■□□□ 1.03
Vps33aQ9D2N9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.48■■□□□ 1.03
Vps33aQ9D2N9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Vps33aQ9D2N9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Vps33aQ9D2N9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vps33aQ9D2N9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Vps33aQ9D2N9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.48■■□□□ 1.03
Vps33aQ9D2N9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vps33aQ9D2N9 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vps33aQ9D2N9 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vps33aQ9D2N9 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vps33aQ9D2N9 Mir3960-201ENSMUST00000198213 73 ntBASIC21.47■■□□□ 1.03
Vps33aQ9D2N9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Vps33aQ9D2N9 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vps33aQ9D2N9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Vps33aQ9D2N9 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.46■■□□□ 1.03
Vps33aQ9D2N9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vps33aQ9D2N9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vps33aQ9D2N9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Vps33aQ9D2N9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms