Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shmt2Q9CZN7 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shmt2Q9CZN7 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.37■□□□□ 0.69
Shmt2Q9CZN7 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shmt2Q9CZN7 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Shmt2Q9CZN7 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Shmt2Q9CZN7 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shmt2Q9CZN7 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shmt2Q9CZN7 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shmt2Q9CZN7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.36■□□□□ 0.69
Shmt2Q9CZN7 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shmt2Q9CZN7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.36■□□□□ 0.69
Shmt2Q9CZN7 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shmt2Q9CZN7 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shmt2Q9CZN7 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shmt2Q9CZN7 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shmt2Q9CZN7 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.35■□□□□ 0.69
Shmt2Q9CZN7 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.35■□□□□ 0.69
Shmt2Q9CZN7 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shmt2Q9CZN7 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Shmt2Q9CZN7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shmt2Q9CZN7 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shmt2Q9CZN7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shmt2Q9CZN7 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shmt2Q9CZN7 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shmt2Q9CZN7 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Shmt2Q9CZN7 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Shmt2Q9CZN7 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shmt2Q9CZN7 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.34■□□□□ 0.69
Shmt2Q9CZN7 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Shmt2Q9CZN7 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Shmt2Q9CZN7 Rps24-207ENSMUST00000224568 714 ntBASIC19.33■□□□□ 0.68
Shmt2Q9CZN7 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.33■□□□□ 0.68
Shmt2Q9CZN7 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shmt2Q9CZN7 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shmt2Q9CZN7 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shmt2Q9CZN7 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shmt2Q9CZN7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shmt2Q9CZN7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Shmt2Q9CZN7 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Shmt2Q9CZN7 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Shmt2Q9CZN7 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.32■□□□□ 0.68
Shmt2Q9CZN7 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shmt2Q9CZN7 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Shmt2Q9CZN7 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shmt2Q9CZN7 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Shmt2Q9CZN7 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Shmt2Q9CZN7 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shmt2Q9CZN7 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Shmt2Q9CZN7 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.32■□□□□ 0.68
Shmt2Q9CZN7 Gm40881-201ENSMUST00000223397 166 ntBASIC19.32■□□□□ 0.68
Shmt2Q9CZN7 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shmt2Q9CZN7 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shmt2Q9CZN7 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Shmt2Q9CZN7 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shmt2Q9CZN7 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shmt2Q9CZN7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shmt2Q9CZN7 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shmt2Q9CZN7 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shmt2Q9CZN7 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.31■□□□□ 0.68
Shmt2Q9CZN7 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shmt2Q9CZN7 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shmt2Q9CZN7 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Shmt2Q9CZN7 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shmt2Q9CZN7 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shmt2Q9CZN7 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shmt2Q9CZN7 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shmt2Q9CZN7 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shmt2Q9CZN7 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shmt2Q9CZN7 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Shmt2Q9CZN7 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Shmt2Q9CZN7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shmt2Q9CZN7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shmt2Q9CZN7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shmt2Q9CZN7 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Shmt2Q9CZN7 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shmt2Q9CZN7 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shmt2Q9CZN7 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shmt2Q9CZN7 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Shmt2Q9CZN7 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.29■□□□□ 0.68
Shmt2Q9CZN7 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.29■□□□□ 0.68
Shmt2Q9CZN7 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Shmt2Q9CZN7 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Shmt2Q9CZN7 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Shmt2Q9CZN7 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.29■□□□□ 0.68
Shmt2Q9CZN7 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Shmt2Q9CZN7 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Shmt2Q9CZN7 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shmt2Q9CZN7 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.28■□□□□ 0.68
Shmt2Q9CZN7 Etf1-202ENSMUST00000180351 108 ntBASIC19.28■□□□□ 0.68
Shmt2Q9CZN7 Gm45102-201ENSMUST00000207427 857 ntBASIC19.28■□□□□ 0.68
Shmt2Q9CZN7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.28■□□□□ 0.68
Shmt2Q9CZN7 Gm9959-201ENSMUST00000068277 390 ntBASIC19.28■□□□□ 0.68
Shmt2Q9CZN7 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Shmt2Q9CZN7 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.28■□□□□ 0.68
Shmt2Q9CZN7 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Shmt2Q9CZN7 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Shmt2Q9CZN7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Shmt2Q9CZN7 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Shmt2Q9CZN7 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms