Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.86■□□□□ 0.77
Trim8Q99PJ2 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Trim8Q99PJ2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim8Q99PJ2 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim8Q99PJ2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim8Q99PJ2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.86■□□□□ 0.77
Trim8Q99PJ2 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trim8Q99PJ2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trim8Q99PJ2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim8Q99PJ2 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim8Q99PJ2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Trim8Q99PJ2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim8Q99PJ2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim8Q99PJ2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim8Q99PJ2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim8Q99PJ2 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim8Q99PJ2 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.85■□□□□ 0.77
Trim8Q99PJ2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Trim8Q99PJ2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Trim8Q99PJ2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Trim8Q99PJ2 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trim8Q99PJ2 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim8Q99PJ2 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim8Q99PJ2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim8Q99PJ2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Trim8Q99PJ2 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim8Q99PJ2 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim8Q99PJ2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trim8Q99PJ2 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.83■□□□□ 0.77
Trim8Q99PJ2 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim8Q99PJ2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trim8Q99PJ2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.83■□□□□ 0.77
Trim8Q99PJ2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trim8Q99PJ2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trim8Q99PJ2 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trim8Q99PJ2 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.83■□□□□ 0.77
Trim8Q99PJ2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Trim8Q99PJ2 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.83■□□□□ 0.76
Trim8Q99PJ2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim8Q99PJ2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Trim8Q99PJ2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trim8Q99PJ2 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim8Q99PJ2 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim8Q99PJ2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Trim8Q99PJ2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Trim8Q99PJ2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim8Q99PJ2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Trim8Q99PJ2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim8Q99PJ2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Trim8Q99PJ2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim8Q99PJ2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Trim8Q99PJ2 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim8Q99PJ2 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Trim8Q99PJ2 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim8Q99PJ2 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim8Q99PJ2 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trim8Q99PJ2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Trim8Q99PJ2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim8Q99PJ2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
Trim8Q99PJ2 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim8Q99PJ2 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.81■□□□□ 0.76
Trim8Q99PJ2 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim8Q99PJ2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim8Q99PJ2 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim8Q99PJ2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim8Q99PJ2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim8Q99PJ2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim8Q99PJ2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim8Q99PJ2 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trim8Q99PJ2 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim8Q99PJ2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Trim8Q99PJ2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim8Q99PJ2 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim8Q99PJ2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim8Q99PJ2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim8Q99PJ2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trim8Q99PJ2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim8Q99PJ2 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trim8Q99PJ2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Trim8Q99PJ2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim8Q99PJ2 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim8Q99PJ2 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.79■□□□□ 0.76
Trim8Q99PJ2 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.79■□□□□ 0.76
Trim8Q99PJ2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trim8Q99PJ2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim8Q99PJ2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.79■□□□□ 0.76
Trim8Q99PJ2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trim8Q99PJ2 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.79■□□□□ 0.76
Trim8Q99PJ2 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Trim8Q99PJ2 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim8Q99PJ2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim8Q99PJ2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.78■□□□□ 0.76
Trim8Q99PJ2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Trim8Q99PJ2 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.78■□□□□ 0.76
Trim8Q99PJ2 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim8Q99PJ2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim8Q99PJ2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Trim8Q99PJ2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Trim8Q99PJ2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim8Q99PJ2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms