Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Msh4Q99MT2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msh4Q99MT2 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.72■□□□□ 0.75
Msh4Q99MT2 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.72■□□□□ 0.75
Msh4Q99MT2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msh4Q99MT2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msh4Q99MT2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Msh4Q99MT2 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msh4Q99MT2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Msh4Q99MT2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msh4Q99MT2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Msh4Q99MT2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Msh4Q99MT2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.71■□□□□ 0.75
Msh4Q99MT2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.71■□□□□ 0.75
Msh4Q99MT2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Msh4Q99MT2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Msh4Q99MT2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Msh4Q99MT2 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
Msh4Q99MT2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msh4Q99MT2 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Msh4Q99MT2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Msh4Q99MT2 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Msh4Q99MT2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Msh4Q99MT2 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msh4Q99MT2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Msh4Q99MT2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.69■□□□□ 0.74
Msh4Q99MT2 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msh4Q99MT2 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Msh4Q99MT2 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msh4Q99MT2 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msh4Q99MT2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msh4Q99MT2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.68■□□□□ 0.74
Msh4Q99MT2 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msh4Q99MT2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msh4Q99MT2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Msh4Q99MT2 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.67■□□□□ 0.74
Msh4Q99MT2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msh4Q99MT2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msh4Q99MT2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msh4Q99MT2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msh4Q99MT2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Msh4Q99MT2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Msh4Q99MT2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Msh4Q99MT2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.66■□□□□ 0.74
Msh4Q99MT2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Msh4Q99MT2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msh4Q99MT2 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msh4Q99MT2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Msh4Q99MT2 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh4Q99MT2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh4Q99MT2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh4Q99MT2 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Msh4Q99MT2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Msh4Q99MT2 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.65■□□□□ 0.74
Msh4Q99MT2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Msh4Q99MT2 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Msh4Q99MT2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Msh4Q99MT2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Msh4Q99MT2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Msh4Q99MT2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Msh4Q99MT2 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Msh4Q99MT2 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Msh4Q99MT2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Msh4Q99MT2 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Msh4Q99MT2 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Msh4Q99MT2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msh4Q99MT2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Msh4Q99MT2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msh4Q99MT2 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Msh4Q99MT2 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Msh4Q99MT2 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Msh4Q99MT2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Msh4Q99MT2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Msh4Q99MT2 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh4Q99MT2 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh4Q99MT2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh4Q99MT2 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh4Q99MT2 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh4Q99MT2 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh4Q99MT2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh4Q99MT2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh4Q99MT2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh4Q99MT2 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh4Q99MT2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh4Q99MT2 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh4Q99MT2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh4Q99MT2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Msh4Q99MT2 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Msh4Q99MT2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Msh4Q99MT2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Msh4Q99MT2 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Msh4Q99MT2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.61■□□□□ 0.73
Msh4Q99MT2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.61■□□□□ 0.73
Msh4Q99MT2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.61■□□□□ 0.73
Msh4Q99MT2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Msh4Q99MT2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Msh4Q99MT2 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Msh4Q99MT2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Msh4Q99MT2 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Msh4Q99MT2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 461.6 ms