Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.83■■□□□ 1.08
Tlr3Q99MB1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Tlr3Q99MB1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Tlr3Q99MB1 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tlr3Q99MB1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tlr3Q99MB1 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tlr3Q99MB1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Tlr3Q99MB1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tlr3Q99MB1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tlr3Q99MB1 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tlr3Q99MB1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.81■■□□□ 1.08
Tlr3Q99MB1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.81■■□□□ 1.08
Tlr3Q99MB1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tlr3Q99MB1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tlr3Q99MB1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Tlr3Q99MB1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tlr3Q99MB1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Tlr3Q99MB1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Tlr3Q99MB1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tlr3Q99MB1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Tlr3Q99MB1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tlr3Q99MB1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Tlr3Q99MB1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Tlr3Q99MB1 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.8■■□□□ 1.08
Tlr3Q99MB1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
Tlr3Q99MB1 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Tlr3Q99MB1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Tlr3Q99MB1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tlr3Q99MB1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.79■■□□□ 1.08
Tlr3Q99MB1 Gm22238-201ENSMUST00000175222 88 ntBASIC21.79■■□□□ 1.08
Tlr3Q99MB1 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tlr3Q99MB1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tlr3Q99MB1 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tlr3Q99MB1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tlr3Q99MB1 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Tlr3Q99MB1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Tlr3Q99MB1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Tlr3Q99MB1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Tlr3Q99MB1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Tlr3Q99MB1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Tlr3Q99MB1 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Tlr3Q99MB1 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Tlr3Q99MB1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Tlr3Q99MB1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Tlr3Q99MB1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Tlr3Q99MB1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
Tlr3Q99MB1 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tlr3Q99MB1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.77■■□□□ 1.08
Tlr3Q99MB1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tlr3Q99MB1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Tlr3Q99MB1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.77■■□□□ 1.08
Tlr3Q99MB1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Tlr3Q99MB1 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.77■■□□□ 1.08
Tlr3Q99MB1 Gm9870-201ENSMUST00000063874 645 ntBASIC21.77■■□□□ 1.08
Tlr3Q99MB1 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.77■■□□□ 1.07
Tlr3Q99MB1 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.77■■□□□ 1.07
Tlr3Q99MB1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tlr3Q99MB1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Tlr3Q99MB1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.76■■□□□ 1.07
Tlr3Q99MB1 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC21.76■■□□□ 1.07
Tlr3Q99MB1 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tlr3Q99MB1 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tlr3Q99MB1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tlr3Q99MB1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tlr3Q99MB1 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Tlr3Q99MB1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tlr3Q99MB1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tlr3Q99MB1 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tlr3Q99MB1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Tlr3Q99MB1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Tlr3Q99MB1 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Tlr3Q99MB1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tlr3Q99MB1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tlr3Q99MB1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tlr3Q99MB1 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Tlr3Q99MB1 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Tlr3Q99MB1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tlr3Q99MB1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tlr3Q99MB1 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Tlr3Q99MB1 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.74■■□□□ 1.07
Tlr3Q99MB1 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tlr3Q99MB1 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Tlr3Q99MB1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
Tlr3Q99MB1 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tlr3Q99MB1 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Tlr3Q99MB1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tlr3Q99MB1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tlr3Q99MB1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Tlr3Q99MB1 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tlr3Q99MB1 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tlr3Q99MB1 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tlr3Q99MB1 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tlr3Q99MB1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Tlr3Q99MB1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tlr3Q99MB1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tlr3Q99MB1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Tlr3Q99MB1 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Tlr3Q99MB1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.72■■□□□ 1.07
Tlr3Q99MB1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Tlr3Q99MB1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms