Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Cstf1Q99LC2 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cstf1Q99LC2 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cstf1Q99LC2 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cstf1Q99LC2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cstf1Q99LC2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cstf1Q99LC2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cstf1Q99LC2 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Cstf1Q99LC2 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.33■□□□□ 0.85
Cstf1Q99LC2 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cstf1Q99LC2 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Cstf1Q99LC2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cstf1Q99LC2 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cstf1Q99LC2 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cstf1Q99LC2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cstf1Q99LC2 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.32■□□□□ 0.84
Cstf1Q99LC2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.32■□□□□ 0.84
Cstf1Q99LC2 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cstf1Q99LC2 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cstf1Q99LC2 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Cstf1Q99LC2 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cstf1Q99LC2 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cstf1Q99LC2 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Cstf1Q99LC2 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cstf1Q99LC2 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.31■□□□□ 0.84
Cstf1Q99LC2 Gm42778-201ENSMUST00000199644 553 ntBASIC20.31■□□□□ 0.84
Cstf1Q99LC2 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cstf1Q99LC2 Gm10602-201ENSMUST00000098239 609 ntBASIC20.31■□□□□ 0.84
Cstf1Q99LC2 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Cstf1Q99LC2 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cstf1Q99LC2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.31■□□□□ 0.84
Cstf1Q99LC2 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cstf1Q99LC2 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cstf1Q99LC2 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cstf1Q99LC2 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.3■□□□□ 0.84
Cstf1Q99LC2 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cstf1Q99LC2 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cstf1Q99LC2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cstf1Q99LC2 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cstf1Q99LC2 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cstf1Q99LC2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cstf1Q99LC2 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cstf1Q99LC2 Smad6-203ENSMUST00000179458 273 ntBASIC20.29■□□□□ 0.84
Cstf1Q99LC2 Gm43530-201ENSMUST00000195920 274 ntBASIC20.29■□□□□ 0.84
Cstf1Q99LC2 Gm10033-202ENSMUST00000211874 928 ntBASIC20.29■□□□□ 0.84
Cstf1Q99LC2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cstf1Q99LC2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cstf1Q99LC2 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cstf1Q99LC2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cstf1Q99LC2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.29■□□□□ 0.84
Cstf1Q99LC2 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cstf1Q99LC2 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cstf1Q99LC2 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cstf1Q99LC2 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cstf1Q99LC2 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cstf1Q99LC2 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cstf1Q99LC2 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.28■□□□□ 0.84
Cstf1Q99LC2 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.28■□□□□ 0.84
Cstf1Q99LC2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cstf1Q99LC2 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cstf1Q99LC2 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Cstf1Q99LC2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cstf1Q99LC2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.27■□□□□ 0.84
Cstf1Q99LC2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Cstf1Q99LC2 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.27■□□□□ 0.84
Cstf1Q99LC2 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.27■□□□□ 0.84
Cstf1Q99LC2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cstf1Q99LC2 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cstf1Q99LC2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cstf1Q99LC2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cstf1Q99LC2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cstf1Q99LC2 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Cstf1Q99LC2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cstf1Q99LC2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Cstf1Q99LC2 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cstf1Q99LC2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Cstf1Q99LC2 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cstf1Q99LC2 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cstf1Q99LC2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cstf1Q99LC2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Cstf1Q99LC2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cstf1Q99LC2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cstf1Q99LC2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cstf1Q99LC2 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.25■□□□□ 0.83
Cstf1Q99LC2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cstf1Q99LC2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cstf1Q99LC2 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cstf1Q99LC2 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cstf1Q99LC2 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cstf1Q99LC2 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.25■□□□□ 0.83
Cstf1Q99LC2 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
Cstf1Q99LC2 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Cstf1Q99LC2 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cstf1Q99LC2 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cstf1Q99LC2 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.24■□□□□ 0.83
Cstf1Q99LC2 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cstf1Q99LC2 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cstf1Q99LC2 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.24■□□□□ 0.83
Cstf1Q99LC2 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Cstf1Q99LC2 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms