Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rfc4Q99J62 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC23.58■■□□□ 1.36
Rfc4Q99J62 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Rfc4Q99J62 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC23.57■■□□□ 1.36
Rfc4Q99J62 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC23.57■■□□□ 1.36
Rfc4Q99J62 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Rfc4Q99J62 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rfc4Q99J62 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rfc4Q99J62 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Rfc4Q99J62 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Rfc4Q99J62 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Rfc4Q99J62 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC23.56■■□□□ 1.36
Rfc4Q99J62 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Rfc4Q99J62 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
Rfc4Q99J62 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rfc4Q99J62 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Rfc4Q99J62 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rfc4Q99J62 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Rfc4Q99J62 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rfc4Q99J62 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC23.55■■□□□ 1.36
Rfc4Q99J62 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rfc4Q99J62 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC23.55■■□□□ 1.36
Rfc4Q99J62 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Rfc4Q99J62 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rfc4Q99J62 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rfc4Q99J62 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Rfc4Q99J62 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC23.54■■□□□ 1.36
Rfc4Q99J62 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
Rfc4Q99J62 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Rfc4Q99J62 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC23.54■■□□□ 1.36
Rfc4Q99J62 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Rfc4Q99J62 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Rfc4Q99J62 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Rfc4Q99J62 Gm10209-201ENSMUST00000203397 1607 ntBASIC23.53■■□□□ 1.36
Rfc4Q99J62 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rfc4Q99J62 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Rfc4Q99J62 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC23.52■■□□□ 1.36
Rfc4Q99J62 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rfc4Q99J62 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Rfc4Q99J62 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rfc4Q99J62 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rfc4Q99J62 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rfc4Q99J62 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Rfc4Q99J62 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rfc4Q99J62 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Rfc4Q99J62 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC23.51■■□□□ 1.35
Rfc4Q99J62 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rfc4Q99J62 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
Rfc4Q99J62 Gm10849-201ENSMUST00000100397 618 ntBASIC23.51■■□□□ 1.35
Rfc4Q99J62 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rfc4Q99J62 Smad6-203ENSMUST00000179458 273 ntBASIC23.51■■□□□ 1.35
Rfc4Q99J62 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC23.51■■□□□ 1.35
Rfc4Q99J62 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Rfc4Q99J62 Gm10129-202ENSMUST00000193100 1316 ntBASIC23.51■■□□□ 1.35
Rfc4Q99J62 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC23.51■■□□□ 1.35
Rfc4Q99J62 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC23.5■■□□□ 1.35
Rfc4Q99J62 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rfc4Q99J62 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC23.5■■□□□ 1.35
Rfc4Q99J62 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC23.5■■□□□ 1.35
Rfc4Q99J62 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rfc4Q99J62 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rfc4Q99J62 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rfc4Q99J62 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rfc4Q99J62 Gm26766-202ENSMUST00000227544 2347 ntBASIC23.49■■□□□ 1.35
Rfc4Q99J62 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Rfc4Q99J62 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rfc4Q99J62 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC23.49■■□□□ 1.35
Rfc4Q99J62 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Rfc4Q99J62 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rfc4Q99J62 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Rfc4Q99J62 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rfc4Q99J62 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
Rfc4Q99J62 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rfc4Q99J62 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Rfc4Q99J62 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC23.48■■□□□ 1.35
Rfc4Q99J62 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rfc4Q99J62 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rfc4Q99J62 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rfc4Q99J62 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Rfc4Q99J62 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC23.47■■□□□ 1.35
Rfc4Q99J62 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC23.47■■□□□ 1.35
Rfc4Q99J62 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rfc4Q99J62 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rfc4Q99J62 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rfc4Q99J62 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
Rfc4Q99J62 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Rfc4Q99J62 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC23.47■■□□□ 1.35
Rfc4Q99J62 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rfc4Q99J62 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Rfc4Q99J62 Gm37179-201ENSMUST00000194862 823 ntBASIC23.46■■□□□ 1.35
Rfc4Q99J62 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Rfc4Q99J62 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
Rfc4Q99J62 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Rfc4Q99J62 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC23.45■■□□□ 1.34
Rfc4Q99J62 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
Rfc4Q99J62 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
Rfc4Q99J62 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Rfc4Q99J62 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Rfc4Q99J62 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Rfc4Q99J62 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms