Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Thumpd1Q99J36 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Thumpd1Q99J36 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Thumpd1Q99J36 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.11■□□□□ 0.49
Thumpd1Q99J36 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Thumpd1Q99J36 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Thumpd1Q99J36 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Thumpd1Q99J36 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Thumpd1Q99J36 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Thumpd1Q99J36 Gm14523-201ENSMUST00000117260 558 ntBASIC18.1■□□□□ 0.49
Thumpd1Q99J36 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.1■□□□□ 0.49
Thumpd1Q99J36 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Thumpd1Q99J36 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Thumpd1Q99J36 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
Thumpd1Q99J36 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Thumpd1Q99J36 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Thumpd1Q99J36 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Thumpd1Q99J36 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Thumpd1Q99J36 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Thumpd1Q99J36 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Thumpd1Q99J36 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Thumpd1Q99J36 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Thumpd1Q99J36 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.09■□□□□ 0.49
Thumpd1Q99J36 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Thumpd1Q99J36 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Thumpd1Q99J36 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Thumpd1Q99J36 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Thumpd1Q99J36 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Thumpd1Q99J36 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Thumpd1Q99J36 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.09■□□□□ 0.49
Thumpd1Q99J36 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Thumpd1Q99J36 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Thumpd1Q99J36 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
Thumpd1Q99J36 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Thumpd1Q99J36 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Thumpd1Q99J36 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.08■□□□□ 0.49
Thumpd1Q99J36 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Thumpd1Q99J36 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Thumpd1Q99J36 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.08■□□□□ 0.48
Thumpd1Q99J36 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Thumpd1Q99J36 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Thumpd1Q99J36 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.08■□□□□ 0.48
Thumpd1Q99J36 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Thumpd1Q99J36 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Thumpd1Q99J36 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Thumpd1Q99J36 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Thumpd1Q99J36 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Thumpd1Q99J36 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Thumpd1Q99J36 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Thumpd1Q99J36 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Thumpd1Q99J36 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Thumpd1Q99J36 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Thumpd1Q99J36 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Thumpd1Q99J36 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.06■□□□□ 0.48
Thumpd1Q99J36 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Thumpd1Q99J36 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Thumpd1Q99J36 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Thumpd1Q99J36 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.06■□□□□ 0.48
Thumpd1Q99J36 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Thumpd1Q99J36 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Thumpd1Q99J36 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Thumpd1Q99J36 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Thumpd1Q99J36 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Thumpd1Q99J36 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.05■□□□□ 0.48
Thumpd1Q99J36 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Thumpd1Q99J36 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Thumpd1Q99J36 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Thumpd1Q99J36 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Thumpd1Q99J36 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Thumpd1Q99J36 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.04■□□□□ 0.48
Thumpd1Q99J36 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.04■□□□□ 0.48
Thumpd1Q99J36 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Thumpd1Q99J36 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Thumpd1Q99J36 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Thumpd1Q99J36 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Thumpd1Q99J36 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Thumpd1Q99J36 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.04■□□□□ 0.48
Thumpd1Q99J36 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Thumpd1Q99J36 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Thumpd1Q99J36 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Thumpd1Q99J36 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Thumpd1Q99J36 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Thumpd1Q99J36 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Thumpd1Q99J36 Gm7332-201ENSMUST00000118351 454 ntBASIC18.03■□□□□ 0.48
Thumpd1Q99J36 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.03■□□□□ 0.48
Thumpd1Q99J36 Gm27502-201ENSMUST00000183495 199 ntBASIC18.03■□□□□ 0.48
Thumpd1Q99J36 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Thumpd1Q99J36 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Thumpd1Q99J36 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.03■□□□□ 0.48
Thumpd1Q99J36 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.03■□□□□ 0.48
Thumpd1Q99J36 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Thumpd1Q99J36 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Thumpd1Q99J36 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.03■□□□□ 0.48
Thumpd1Q99J36 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Thumpd1Q99J36 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Thumpd1Q99J36 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.02■□□□□ 0.48
Thumpd1Q99J36 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Thumpd1Q99J36 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Thumpd1Q99J36 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Thumpd1Q99J36 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms