Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdha9Q91Y11 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdha9Q91Y11 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdha9Q91Y11 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdha9Q91Y11 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Pcdha9Q91Y11 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdha9Q91Y11 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.67■■□□□ 1.06
Pcdha9Q91Y11 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.67■■□□□ 1.06
Pcdha9Q91Y11 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Pcdha9Q91Y11 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.67■■□□□ 1.06
Pcdha9Q91Y11 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdha9Q91Y11 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.67■■□□□ 1.06
Pcdha9Q91Y11 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdha9Q91Y11 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdha9Q91Y11 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdha9Q91Y11 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdha9Q91Y11 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.66■■□□□ 1.06
Pcdha9Q91Y11 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdha9Q91Y11 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdha9Q91Y11 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.66■■□□□ 1.06
Pcdha9Q91Y11 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdha9Q91Y11 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdha9Q91Y11 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdha9Q91Y11 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdha9Q91Y11 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdha9Q91Y11 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.65■■□□□ 1.06
Pcdha9Q91Y11 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.65■■□□□ 1.06
Pcdha9Q91Y11 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.65■■□□□ 1.06
Pcdha9Q91Y11 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdha9Q91Y11 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdha9Q91Y11 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdha9Q91Y11 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdha9Q91Y11 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
Pcdha9Q91Y11 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdha9Q91Y11 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdha9Q91Y11 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.64■■□□□ 1.05
Pcdha9Q91Y11 Golgb1-201ENSMUST00000023534 498 ntBASIC21.64■■□□□ 1.05
Pcdha9Q91Y11 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdha9Q91Y11 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdha9Q91Y11 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdha9Q91Y11 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
Pcdha9Q91Y11 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdha9Q91Y11 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdha9Q91Y11 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdha9Q91Y11 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdha9Q91Y11 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Pcdha9Q91Y11 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Pcdha9Q91Y11 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdha9Q91Y11 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Pcdha9Q91Y11 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Pcdha9Q91Y11 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha9Q91Y11 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Pcdha9Q91Y11 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha9Q91Y11 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha9Q91Y11 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha9Q91Y11 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha9Q91Y11 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha9Q91Y11 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha9Q91Y11 Gm9847-201ENSMUST00000052528 599 ntBASIC21.62■■□□□ 1.05
Pcdha9Q91Y11 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Pcdha9Q91Y11 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha9Q91Y11 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha9Q91Y11 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha9Q91Y11 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha9Q91Y11 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha9Q91Y11 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha9Q91Y11 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha9Q91Y11 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha9Q91Y11 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdha9Q91Y11 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Pcdha9Q91Y11 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Pcdha9Q91Y11 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.61■■□□□ 1.05
Pcdha9Q91Y11 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdha9Q91Y11 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdha9Q91Y11 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdha9Q91Y11 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdha9Q91Y11 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
Pcdha9Q91Y11 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdha9Q91Y11 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdha9Q91Y11 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdha9Q91Y11 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Pcdha9Q91Y11 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdha9Q91Y11 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.6■■□□□ 1.05
Pcdha9Q91Y11 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Pcdha9Q91Y11 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Pcdha9Q91Y11 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.6■■□□□ 1.05
Pcdha9Q91Y11 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdha9Q91Y11 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Pcdha9Q91Y11 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdha9Q91Y11 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdha9Q91Y11 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
Pcdha9Q91Y11 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdha9Q91Y11 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdha9Q91Y11 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdha9Q91Y11 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.59■■□□□ 1.05
Pcdha9Q91Y11 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Pcdha9Q91Y11 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdha9Q91Y11 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdha9Q91Y11 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdha9Q91Y11 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms