Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.54■□□□□ 0.72
Pcdhga11Q91XY8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhga11Q91XY8 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhga11Q91XY8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhga11Q91XY8 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhga11Q91XY8 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhga11Q91XY8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Pcdhga11Q91XY8 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.53■□□□□ 0.72
Pcdhga11Q91XY8 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.53■□□□□ 0.72
Pcdhga11Q91XY8 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhga11Q91XY8 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Pcdhga11Q91XY8 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Pcdhga11Q91XY8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhga11Q91XY8 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhga11Q91XY8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhga11Q91XY8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhga11Q91XY8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.52■□□□□ 0.72
Pcdhga11Q91XY8 Rps24-207ENSMUST00000224568 714 ntBASIC19.52■□□□□ 0.72
Pcdhga11Q91XY8 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhga11Q91XY8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Pcdhga11Q91XY8 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Pcdhga11Q91XY8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pcdhga11Q91XY8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhga11Q91XY8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhga11Q91XY8 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Pcdhga11Q91XY8 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.51■□□□□ 0.71
Pcdhga11Q91XY8 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Pcdhga11Q91XY8 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhga11Q91XY8 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhga11Q91XY8 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.51■□□□□ 0.71
Pcdhga11Q91XY8 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhga11Q91XY8 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhga11Q91XY8 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhga11Q91XY8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhga11Q91XY8 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhga11Q91XY8 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhga11Q91XY8 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhga11Q91XY8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhga11Q91XY8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.5■□□□□ 0.71
Pcdhga11Q91XY8 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhga11Q91XY8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.5■□□□□ 0.71
Pcdhga11Q91XY8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhga11Q91XY8 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhga11Q91XY8 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhga11Q91XY8 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhga11Q91XY8 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhga11Q91XY8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhga11Q91XY8 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhga11Q91XY8 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhga11Q91XY8 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhga11Q91XY8 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhga11Q91XY8 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.49■□□□□ 0.71
Pcdhga11Q91XY8 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhga11Q91XY8 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhga11Q91XY8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhga11Q91XY8 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhga11Q91XY8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhga11Q91XY8 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Pcdhga11Q91XY8 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhga11Q91XY8 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhga11Q91XY8 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhga11Q91XY8 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhga11Q91XY8 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhga11Q91XY8 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Pcdhga11Q91XY8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhga11Q91XY8 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhga11Q91XY8 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhga11Q91XY8 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.48■□□□□ 0.71
Pcdhga11Q91XY8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Pcdhga11Q91XY8 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhga11Q91XY8 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhga11Q91XY8 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Pcdhga11Q91XY8 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Pcdhga11Q91XY8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.48■□□□□ 0.71
Pcdhga11Q91XY8 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhga11Q91XY8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhga11Q91XY8 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhga11Q91XY8 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
Pcdhga11Q91XY8 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhga11Q91XY8 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.47■□□□□ 0.71
Pcdhga11Q91XY8 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhga11Q91XY8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.47■□□□□ 0.71
Pcdhga11Q91XY8 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Pcdhga11Q91XY8 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhga11Q91XY8 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pcdhga11Q91XY8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhga11Q91XY8 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhga11Q91XY8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Pcdhga11Q91XY8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhga11Q91XY8 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.46■□□□□ 0.71
Pcdhga11Q91XY8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhga11Q91XY8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pcdhga11Q91XY8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhga11Q91XY8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Pcdhga11Q91XY8 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Pcdhga11Q91XY8 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhga11Q91XY8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhga11Q91XY8 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.45■□□□□ 0.7
Pcdhga11Q91XY8 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pcdhga11Q91XY8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms