Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhga9Q91XX9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.11■□□□□ 0.81
Pcdhga9Q91XX9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhga9Q91XX9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.11■□□□□ 0.81
Pcdhga9Q91XX9 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.11■□□□□ 0.81
Pcdhga9Q91XX9 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhga9Q91XX9 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhga9Q91XX9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhga9Q91XX9 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.11■□□□□ 0.81
Pcdhga9Q91XX9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Pcdhga9Q91XX9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhga9Q91XX9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhga9Q91XX9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhga9Q91XX9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhga9Q91XX9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.1■□□□□ 0.81
Pcdhga9Q91XX9 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhga9Q91XX9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhga9Q91XX9 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhga9Q91XX9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhga9Q91XX9 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhga9Q91XX9 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
Pcdhga9Q91XX9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.09■□□□□ 0.81
Pcdhga9Q91XX9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhga9Q91XX9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Pcdhga9Q91XX9 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhga9Q91XX9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhga9Q91XX9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhga9Q91XX9 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.08■□□□□ 0.81
Pcdhga9Q91XX9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhga9Q91XX9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Pcdhga9Q91XX9 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.08■□□□□ 0.81
Pcdhga9Q91XX9 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.81
Pcdhga9Q91XX9 Gm9870-201ENSMUST00000063874 645 ntBASIC20.08■□□□□ 0.81
Pcdhga9Q91XX9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhga9Q91XX9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhga9Q91XX9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhga9Q91XX9 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhga9Q91XX9 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.07■□□□□ 0.8
Pcdhga9Q91XX9 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.07■□□□□ 0.8
Pcdhga9Q91XX9 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhga9Q91XX9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhga9Q91XX9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.07■□□□□ 0.8
Pcdhga9Q91XX9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhga9Q91XX9 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Pcdhga9Q91XX9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
Pcdhga9Q91XX9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.07■□□□□ 0.8
Pcdhga9Q91XX9 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.07■□□□□ 0.8
Pcdhga9Q91XX9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.06■□□□□ 0.8
Pcdhga9Q91XX9 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.06■□□□□ 0.8
Pcdhga9Q91XX9 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhga9Q91XX9 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhga9Q91XX9 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhga9Q91XX9 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Pcdhga9Q91XX9 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhga9Q91XX9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhga9Q91XX9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Pcdhga9Q91XX9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhga9Q91XX9 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhga9Q91XX9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhga9Q91XX9 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.04■□□□□ 0.8
Pcdhga9Q91XX9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhga9Q91XX9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhga9Q91XX9 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhga9Q91XX9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhga9Q91XX9 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhga9Q91XX9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhga9Q91XX9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhga9Q91XX9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhga9Q91XX9 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhga9Q91XX9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhga9Q91XX9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.03■□□□□ 0.8
Pcdhga9Q91XX9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.03■□□□□ 0.8
Pcdhga9Q91XX9 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Pcdhga9Q91XX9 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.03■□□□□ 0.8
Pcdhga9Q91XX9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhga9Q91XX9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhga9Q91XX9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhga9Q91XX9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.03■□□□□ 0.8
Pcdhga9Q91XX9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Pcdhga9Q91XX9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhga9Q91XX9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhga9Q91XX9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.02■□□□□ 0.8
Pcdhga9Q91XX9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhga9Q91XX9 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhga9Q91XX9 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.02■□□□□ 0.8
Pcdhga9Q91XX9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhga9Q91XX9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
Pcdhga9Q91XX9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhga9Q91XX9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhga9Q91XX9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdhga9Q91XX9 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdhga9Q91XX9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhga9Q91XX9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.01■□□□□ 0.79
Pcdhga9Q91XX9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.01■□□□□ 0.79
Pcdhga9Q91XX9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.01■□□□□ 0.79
Pcdhga9Q91XX9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhga9Q91XX9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhga9Q91XX9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhga9Q91XX9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhga9Q91XX9 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms