Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb2Q91XX7 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.06■□□□□ 0.64
Pcdhgb2Q91XX7 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb2Q91XX7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb2Q91XX7 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb2Q91XX7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pcdhgb2Q91XX7 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb2Q91XX7 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Pcdhgb2Q91XX7 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb2Q91XX7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb2Q91XX7 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb2Q91XX7 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb2Q91XX7 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb2Q91XX7 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb2Q91XX7 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb2Q91XX7 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pcdhgb2Q91XX7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Pcdhgb2Q91XX7 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Pcdhgb2Q91XX7 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgb2Q91XX7 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgb2Q91XX7 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgb2Q91XX7 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Pcdhgb2Q91XX7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgb2Q91XX7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgb2Q91XX7 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgb2Q91XX7 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgb2Q91XX7 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pcdhgb2Q91XX7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
Pcdhgb2Q91XX7 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgb2Q91XX7 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgb2Q91XX7 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgb2Q91XX7 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.03■□□□□ 0.64
Pcdhgb2Q91XX7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgb2Q91XX7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgb2Q91XX7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgb2Q91XX7 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgb2Q91XX7 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pcdhgb2Q91XX7 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Pcdhgb2Q91XX7 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhgb2Q91XX7 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Pcdhgb2Q91XX7 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhgb2Q91XX7 Gm10420-201ENSMUST00000121713 882 ntBASIC19.02■□□□□ 0.64
Pcdhgb2Q91XX7 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhgb2Q91XX7 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhgb2Q91XX7 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhgb2Q91XX7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pcdhgb2Q91XX7 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdhgb2Q91XX7 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pcdhgb2Q91XX7 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.01■□□□□ 0.63
Pcdhgb2Q91XX7 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgb2Q91XX7 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgb2Q91XX7 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Pcdhgb2Q91XX7 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgb2Q91XX7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgb2Q91XX7 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Pcdhgb2Q91XX7 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgb2Q91XX7 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Pcdhgb2Q91XX7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgb2Q91XX7 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pcdhgb2Q91XX7 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb2Q91XX7 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb2Q91XX7 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19■□□□□ 0.63
Pcdhgb2Q91XX7 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb2Q91XX7 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb2Q91XX7 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb2Q91XX7 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb2Q91XX7 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb2Q91XX7 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19■□□□□ 0.63
Pcdhgb2Q91XX7 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pcdhgb2Q91XX7 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhgb2Q91XX7 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.99■□□□□ 0.63
Pcdhgb2Q91XX7 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.99■□□□□ 0.63
Pcdhgb2Q91XX7 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.99■□□□□ 0.63
Pcdhgb2Q91XX7 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.99■□□□□ 0.63
Pcdhgb2Q91XX7 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Pcdhgb2Q91XX7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhgb2Q91XX7 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhgb2Q91XX7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgb2Q91XX7 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgb2Q91XX7 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgb2Q91XX7 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.98■□□□□ 0.63
Pcdhgb2Q91XX7 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Pcdhgb2Q91XX7 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgb2Q91XX7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgb2Q91XX7 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgb2Q91XX7 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhgb2Q91XX7 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgb2Q91XX7 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Pcdhgb2Q91XX7 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgb2Q91XX7 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgb2Q91XX7 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Pcdhgb2Q91XX7 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Pcdhgb2Q91XX7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhgb2Q91XX7 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhgb2Q91XX7 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhgb2Q91XX7 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhgb2Q91XX7 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Pcdhgb2Q91XX7 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Pcdhgb2Q91XX7 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhgb2Q91XX7 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms