Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cspg4Q8VHY0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cspg4Q8VHY0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.64■□□□□ 0.41
Cspg4Q8VHY0 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.64■□□□□ 0.41
Cspg4Q8VHY0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cspg4Q8VHY0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cspg4Q8VHY0 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.64■□□□□ 0.41
Cspg4Q8VHY0 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.64■□□□□ 0.41
Cspg4Q8VHY0 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Cspg4Q8VHY0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cspg4Q8VHY0 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.64■□□□□ 0.41
Cspg4Q8VHY0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.63■□□□□ 0.41
Cspg4Q8VHY0 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cspg4Q8VHY0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cspg4Q8VHY0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cspg4Q8VHY0 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cspg4Q8VHY0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Cspg4Q8VHY0 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cspg4Q8VHY0 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cspg4Q8VHY0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.63■□□□□ 0.41
Cspg4Q8VHY0 Gm42778-201ENSMUST00000199644 553 ntBASIC17.63■□□□□ 0.41
Cspg4Q8VHY0 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cspg4Q8VHY0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cspg4Q8VHY0 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Cspg4Q8VHY0 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.62■□□□□ 0.41
Cspg4Q8VHY0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cspg4Q8VHY0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cspg4Q8VHY0 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cspg4Q8VHY0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.62■□□□□ 0.41
Cspg4Q8VHY0 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.62■□□□□ 0.41
Cspg4Q8VHY0 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cspg4Q8VHY0 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cspg4Q8VHY0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cspg4Q8VHY0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cspg4Q8VHY0 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cspg4Q8VHY0 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cspg4Q8VHY0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cspg4Q8VHY0 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cspg4Q8VHY0 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Cspg4Q8VHY0 Gm20760-201ENSMUST00000179197 648 ntBASIC17.61■□□□□ 0.41
Cspg4Q8VHY0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Cspg4Q8VHY0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.6■□□□□ 0.41
Cspg4Q8VHY0 Gm12527-201ENSMUST00000117967 564 ntBASIC17.6■□□□□ 0.41
Cspg4Q8VHY0 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cspg4Q8VHY0 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Cspg4Q8VHY0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cspg4Q8VHY0 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cspg4Q8VHY0 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cspg4Q8VHY0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Cspg4Q8VHY0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Cspg4Q8VHY0 Mir6982-201ENSMUST00000184354 68 ntBASIC17.59■□□□□ 0.41
Cspg4Q8VHY0 Gm8520-201ENSMUST00000186517 868 ntBASIC17.59■□□□□ 0.41
Cspg4Q8VHY0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.59■□□□□ 0.41
Cspg4Q8VHY0 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Cspg4Q8VHY0 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cspg4Q8VHY0 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cspg4Q8VHY0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cspg4Q8VHY0 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cspg4Q8VHY0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Cspg4Q8VHY0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.58■□□□□ 0.41
Cspg4Q8VHY0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.58■□□□□ 0.41
Cspg4Q8VHY0 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Cspg4Q8VHY0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cspg4Q8VHY0 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Cspg4Q8VHY0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC17.58■□□□□ 0.41
Cspg4Q8VHY0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cspg4Q8VHY0 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.58■□□□□ 0.4
Cspg4Q8VHY0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cspg4Q8VHY0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cspg4Q8VHY0 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cspg4Q8VHY0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cspg4Q8VHY0 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
Cspg4Q8VHY0 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.58■□□□□ 0.4
Cspg4Q8VHY0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.58■□□□□ 0.4
Cspg4Q8VHY0 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Cspg4Q8VHY0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Cspg4Q8VHY0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Cspg4Q8VHY0 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cspg4Q8VHY0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cspg4Q8VHY0 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cspg4Q8VHY0 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cspg4Q8VHY0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cspg4Q8VHY0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cspg4Q8VHY0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cspg4Q8VHY0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.57■□□□□ 0.4
Cspg4Q8VHY0 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.57■□□□□ 0.4
Cspg4Q8VHY0 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cspg4Q8VHY0 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cspg4Q8VHY0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cspg4Q8VHY0 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cspg4Q8VHY0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cspg4Q8VHY0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Cspg4Q8VHY0 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cspg4Q8VHY0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cspg4Q8VHY0 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.56■□□□□ 0.4
Cspg4Q8VHY0 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cspg4Q8VHY0 Gm4968-201ENSMUST00000071458 858 ntBASIC17.56■□□□□ 0.4
Cspg4Q8VHY0 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cspg4Q8VHY0 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cspg4Q8VHY0 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms