Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Vps39Q8R5L3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vps39Q8R5L3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
Vps39Q8R5L3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.35■□□□□ 0.85
Vps39Q8R5L3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Vps39Q8R5L3 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vps39Q8R5L3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Vps39Q8R5L3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Vps39Q8R5L3 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.35■□□□□ 0.85
Vps39Q8R5L3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps39Q8R5L3 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps39Q8R5L3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vps39Q8R5L3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps39Q8R5L3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps39Q8R5L3 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps39Q8R5L3 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps39Q8R5L3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vps39Q8R5L3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.33■□□□□ 0.85
Vps39Q8R5L3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Vps39Q8R5L3 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vps39Q8R5L3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Vps39Q8R5L3 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vps39Q8R5L3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps39Q8R5L3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps39Q8R5L3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps39Q8R5L3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Vps39Q8R5L3 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps39Q8R5L3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.32■□□□□ 0.84
Vps39Q8R5L3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps39Q8R5L3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vps39Q8R5L3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Vps39Q8R5L3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Vps39Q8R5L3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Vps39Q8R5L3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vps39Q8R5L3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vps39Q8R5L3 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Vps39Q8R5L3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vps39Q8R5L3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Vps39Q8R5L3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Vps39Q8R5L3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vps39Q8R5L3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vps39Q8R5L3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vps39Q8R5L3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Vps39Q8R5L3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vps39Q8R5L3 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.29■□□□□ 0.84
Vps39Q8R5L3 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vps39Q8R5L3 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vps39Q8R5L3 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vps39Q8R5L3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps39Q8R5L3 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.28■□□□□ 0.84
Vps39Q8R5L3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.28■□□□□ 0.84
Vps39Q8R5L3 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps39Q8R5L3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps39Q8R5L3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps39Q8R5L3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps39Q8R5L3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Vps39Q8R5L3 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps39Q8R5L3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Vps39Q8R5L3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.28■□□□□ 0.84
Vps39Q8R5L3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vps39Q8R5L3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps39Q8R5L3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps39Q8R5L3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Vps39Q8R5L3 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vps39Q8R5L3 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps39Q8R5L3 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps39Q8R5L3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps39Q8R5L3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.26■□□□□ 0.83
Vps39Q8R5L3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.26■□□□□ 0.83
Vps39Q8R5L3 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps39Q8R5L3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Vps39Q8R5L3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps39Q8R5L3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Vps39Q8R5L3 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vps39Q8R5L3 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vps39Q8R5L3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Vps39Q8R5L3 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vps39Q8R5L3 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vps39Q8R5L3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vps39Q8R5L3 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vps39Q8R5L3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vps39Q8R5L3 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vps39Q8R5L3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps39Q8R5L3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps39Q8R5L3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Vps39Q8R5L3 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.24■□□□□ 0.83
Vps39Q8R5L3 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vps39Q8R5L3 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.24■□□□□ 0.83
Vps39Q8R5L3 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.24■□□□□ 0.83
Vps39Q8R5L3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.23■□□□□ 0.83
Vps39Q8R5L3 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Vps39Q8R5L3 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Vps39Q8R5L3 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps39Q8R5L3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vps39Q8R5L3 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Vps39Q8R5L3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Vps39Q8R5L3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Vps39Q8R5L3 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.23■□□□□ 0.83
Vps39Q8R5L3 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.23■□□□□ 0.83
Vps39Q8R5L3 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms