Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Slf1Q8R3P9 Gm7332-201ENSMUST00000118351 454 ntBASIC20.45■□□□□ 0.86
Slf1Q8R3P9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
Slf1Q8R3P9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.45■□□□□ 0.86
Slf1Q8R3P9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Slf1Q8R3P9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Slf1Q8R3P9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.44■□□□□ 0.86
Slf1Q8R3P9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.44■□□□□ 0.86
Slf1Q8R3P9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.44■□□□□ 0.86
Slf1Q8R3P9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Slf1Q8R3P9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Slf1Q8R3P9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.44■□□□□ 0.86
Slf1Q8R3P9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Slf1Q8R3P9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Slf1Q8R3P9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Slf1Q8R3P9 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slf1Q8R3P9 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slf1Q8R3P9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Slf1Q8R3P9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Slf1Q8R3P9 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.42■□□□□ 0.86
Slf1Q8R3P9 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slf1Q8R3P9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slf1Q8R3P9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.42■□□□□ 0.86
Slf1Q8R3P9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slf1Q8R3P9 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slf1Q8R3P9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Slf1Q8R3P9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slf1Q8R3P9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Slf1Q8R3P9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Slf1Q8R3P9 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.41■□□□□ 0.86
Slf1Q8R3P9 Gm12366-201ENSMUST00000121722 873 ntBASIC20.41■□□□□ 0.86
Slf1Q8R3P9 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.41■□□□□ 0.86
Slf1Q8R3P9 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Slf1Q8R3P9 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.41■□□□□ 0.86
Slf1Q8R3P9 Gm5786-201ENSMUST00000085368 882 ntBASIC20.41■□□□□ 0.86
Slf1Q8R3P9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slf1Q8R3P9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slf1Q8R3P9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slf1Q8R3P9 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Slf1Q8R3P9 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Slf1Q8R3P9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Slf1Q8R3P9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Slf1Q8R3P9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slf1Q8R3P9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Slf1Q8R3P9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Slf1Q8R3P9 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slf1Q8R3P9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Slf1Q8R3P9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slf1Q8R3P9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slf1Q8R3P9 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slf1Q8R3P9 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
Slf1Q8R3P9 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slf1Q8R3P9 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slf1Q8R3P9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slf1Q8R3P9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slf1Q8R3P9 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Slf1Q8R3P9 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.38■□□□□ 0.85
Slf1Q8R3P9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Slf1Q8R3P9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slf1Q8R3P9 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slf1Q8R3P9 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Slf1Q8R3P9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slf1Q8R3P9 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Slf1Q8R3P9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slf1Q8R3P9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slf1Q8R3P9 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slf1Q8R3P9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Slf1Q8R3P9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slf1Q8R3P9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slf1Q8R3P9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slf1Q8R3P9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slf1Q8R3P9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slf1Q8R3P9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Slf1Q8R3P9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Slf1Q8R3P9 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slf1Q8R3P9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slf1Q8R3P9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slf1Q8R3P9 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slf1Q8R3P9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Slf1Q8R3P9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Slf1Q8R3P9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.37■□□□□ 0.85
Slf1Q8R3P9 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Slf1Q8R3P9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slf1Q8R3P9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slf1Q8R3P9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slf1Q8R3P9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slf1Q8R3P9 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.36■□□□□ 0.85
Slf1Q8R3P9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slf1Q8R3P9 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.36■□□□□ 0.85
Slf1Q8R3P9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slf1Q8R3P9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slf1Q8R3P9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slf1Q8R3P9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slf1Q8R3P9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Slf1Q8R3P9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Slf1Q8R3P9 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slf1Q8R3P9 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Slf1Q8R3P9 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slf1Q8R3P9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slf1Q8R3P9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms