Protein–RNA interactions for Protein: Q8R2C8

Vmn1r18, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r18Q8R2C8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vmn1r18Q8R2C8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vmn1r18Q8R2C8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vmn1r18Q8R2C8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Vmn1r18Q8R2C8 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.6■□□□□ 0.89
Vmn1r18Q8R2C8 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Vmn1r18Q8R2C8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Vmn1r18Q8R2C8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.59■□□□□ 0.89
Vmn1r18Q8R2C8 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.59■□□□□ 0.89
Vmn1r18Q8R2C8 Gm43137-201ENSMUST00000198052 594 ntBASIC20.59■□□□□ 0.89
Vmn1r18Q8R2C8 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.59■□□□□ 0.89
Vmn1r18Q8R2C8 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Vmn1r18Q8R2C8 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Vmn1r18Q8R2C8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Vmn1r18Q8R2C8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Vmn1r18Q8R2C8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Vmn1r18Q8R2C8 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vmn1r18Q8R2C8 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vmn1r18Q8R2C8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vmn1r18Q8R2C8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Vmn1r18Q8R2C8 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vmn1r18Q8R2C8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vmn1r18Q8R2C8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Vmn1r18Q8R2C8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vmn1r18Q8R2C8 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.57■□□□□ 0.88
Vmn1r18Q8R2C8 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vmn1r18Q8R2C8 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Vmn1r18Q8R2C8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Vmn1r18Q8R2C8 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vmn1r18Q8R2C8 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Vmn1r18Q8R2C8 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vmn1r18Q8R2C8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Vmn1r18Q8R2C8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Vmn1r18Q8R2C8 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.56■□□□□ 0.88
Vmn1r18Q8R2C8 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vmn1r18Q8R2C8 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Vmn1r18Q8R2C8 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vmn1r18Q8R2C8 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
Vmn1r18Q8R2C8 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Vmn1r18Q8R2C8 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vmn1r18Q8R2C8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.55■□□□□ 0.88
Vmn1r18Q8R2C8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.55■□□□□ 0.88
Vmn1r18Q8R2C8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vmn1r18Q8R2C8 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vmn1r18Q8R2C8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Vmn1r18Q8R2C8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Vmn1r18Q8R2C8 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vmn1r18Q8R2C8 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vmn1r18Q8R2C8 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Vmn1r18Q8R2C8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Vmn1r18Q8R2C8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vmn1r18Q8R2C8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vmn1r18Q8R2C8 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.54■□□□□ 0.88
Vmn1r18Q8R2C8 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.54■□□□□ 0.88
Vmn1r18Q8R2C8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Vmn1r18Q8R2C8 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vmn1r18Q8R2C8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vmn1r18Q8R2C8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Vmn1r18Q8R2C8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vmn1r18Q8R2C8 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.53■□□□□ 0.88
Vmn1r18Q8R2C8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Vmn1r18Q8R2C8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.53■□□□□ 0.88
Vmn1r18Q8R2C8 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vmn1r18Q8R2C8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Vmn1r18Q8R2C8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vmn1r18Q8R2C8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Vmn1r18Q8R2C8 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.53■□□□□ 0.88
Vmn1r18Q8R2C8 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.53■□□□□ 0.88
Vmn1r18Q8R2C8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vmn1r18Q8R2C8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.53■□□□□ 0.88
Vmn1r18Q8R2C8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Vmn1r18Q8R2C8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vmn1r18Q8R2C8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vmn1r18Q8R2C8 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vmn1r18Q8R2C8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
Vmn1r18Q8R2C8 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Vmn1r18Q8R2C8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vmn1r18Q8R2C8 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.52■□□□□ 0.88
Vmn1r18Q8R2C8 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Vmn1r18Q8R2C8 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Vmn1r18Q8R2C8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vmn1r18Q8R2C8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vmn1r18Q8R2C8 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vmn1r18Q8R2C8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Vmn1r18Q8R2C8 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Vmn1r18Q8R2C8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vmn1r18Q8R2C8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vmn1r18Q8R2C8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.5■□□□□ 0.87
Vmn1r18Q8R2C8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Vmn1r18Q8R2C8 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vmn1r18Q8R2C8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vmn1r18Q8R2C8 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Vmn1r18Q8R2C8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.49■□□□□ 0.87
Vmn1r18Q8R2C8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.49■□□□□ 0.87
Vmn1r18Q8R2C8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Vmn1r18Q8R2C8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vmn1r18Q8R2C8 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vmn1r18Q8R2C8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vmn1r18Q8R2C8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Vmn1r18Q8R2C8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms