Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Sf3a1Q8K4Z5 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Sf3a1Q8K4Z5 AC122428.2-201ENSMUST00000216321 1832 ntBASIC24.87■■□□□ 1.57
Sf3a1Q8K4Z5 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC24.87■■□□□ 1.57
Sf3a1Q8K4Z5 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Sf3a1Q8K4Z5 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Sf3a1Q8K4Z5 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Sf3a1Q8K4Z5 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC24.86■■□□□ 1.57
Sf3a1Q8K4Z5 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Sf3a1Q8K4Z5 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Sf3a1Q8K4Z5 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC24.86■■□□□ 1.57
Sf3a1Q8K4Z5 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Sf3a1Q8K4Z5 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
Sf3a1Q8K4Z5 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Sf3a1Q8K4Z5 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Sf3a1Q8K4Z5 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Sf3a1Q8K4Z5 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC24.85■■□□□ 1.57
Sf3a1Q8K4Z5 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC24.85■■□□□ 1.57
Sf3a1Q8K4Z5 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC24.85■■□□□ 1.57
Sf3a1Q8K4Z5 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Sf3a1Q8K4Z5 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Sf3a1Q8K4Z5 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Sf3a1Q8K4Z5 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Sf3a1Q8K4Z5 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC24.85■■□□□ 1.57
Sf3a1Q8K4Z5 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Sf3a1Q8K4Z5 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC24.85■■□□□ 1.57
Sf3a1Q8K4Z5 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Sf3a1Q8K4Z5 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Sf3a1Q8K4Z5 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC24.84■■□□□ 1.57
Sf3a1Q8K4Z5 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Sf3a1Q8K4Z5 Gm9847-201ENSMUST00000052528 599 ntBASIC24.84■■□□□ 1.57
Sf3a1Q8K4Z5 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Sf3a1Q8K4Z5 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Sf3a1Q8K4Z5 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Sf3a1Q8K4Z5 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Sf3a1Q8K4Z5 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Sf3a1Q8K4Z5 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Sf3a1Q8K4Z5 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC24.83■■□□□ 1.57
Sf3a1Q8K4Z5 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Sf3a1Q8K4Z5 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC24.83■■□□□ 1.57
Sf3a1Q8K4Z5 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.57
Sf3a1Q8K4Z5 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
Sf3a1Q8K4Z5 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Sf3a1Q8K4Z5 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
Sf3a1Q8K4Z5 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Sf3a1Q8K4Z5 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Sf3a1Q8K4Z5 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
Sf3a1Q8K4Z5 Golgb1-201ENSMUST00000023534 498 ntBASIC24.82■■□□□ 1.56
Sf3a1Q8K4Z5 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC24.82■■□□□ 1.56
Sf3a1Q8K4Z5 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Sf3a1Q8K4Z5 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
Sf3a1Q8K4Z5 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Sf3a1Q8K4Z5 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Sf3a1Q8K4Z5 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Sf3a1Q8K4Z5 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC24.81■■□□□ 1.56
Sf3a1Q8K4Z5 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Sf3a1Q8K4Z5 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
Sf3a1Q8K4Z5 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Sf3a1Q8K4Z5 Krt8-ps-201ENSMUST00000208495 945 ntBASIC24.81■■□□□ 1.56
Sf3a1Q8K4Z5 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
Sf3a1Q8K4Z5 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
Sf3a1Q8K4Z5 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
Sf3a1Q8K4Z5 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Sf3a1Q8K4Z5 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Sf3a1Q8K4Z5 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC24.8■■□□□ 1.56
Sf3a1Q8K4Z5 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Sf3a1Q8K4Z5 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC24.8■■□□□ 1.56
Sf3a1Q8K4Z5 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
Sf3a1Q8K4Z5 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC24.8■■□□□ 1.56
Sf3a1Q8K4Z5 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
Sf3a1Q8K4Z5 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Sf3a1Q8K4Z5 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC24.8■■□□□ 1.56
Sf3a1Q8K4Z5 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Sf3a1Q8K4Z5 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Sf3a1Q8K4Z5 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Sf3a1Q8K4Z5 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
Sf3a1Q8K4Z5 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Sf3a1Q8K4Z5 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
Sf3a1Q8K4Z5 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Sf3a1Q8K4Z5 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Sf3a1Q8K4Z5 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Sf3a1Q8K4Z5 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Sf3a1Q8K4Z5 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
Sf3a1Q8K4Z5 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
Sf3a1Q8K4Z5 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Sf3a1Q8K4Z5 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Sf3a1Q8K4Z5 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
Sf3a1Q8K4Z5 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
Sf3a1Q8K4Z5 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC24.78■■□□□ 1.56
Sf3a1Q8K4Z5 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
Sf3a1Q8K4Z5 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
Sf3a1Q8K4Z5 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Sf3a1Q8K4Z5 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Sf3a1Q8K4Z5 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Sf3a1Q8K4Z5 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Sf3a1Q8K4Z5 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Sf3a1Q8K4Z5 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
Sf3a1Q8K4Z5 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Sf3a1Q8K4Z5 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC24.76■■□□□ 1.55
Sf3a1Q8K4Z5 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms