Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim5Q8CI51 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim5Q8CI51 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim5Q8CI51 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Pdlim5Q8CI51 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim5Q8CI51 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pdlim5Q8CI51 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Pdlim5Q8CI51 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim5Q8CI51 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim5Q8CI51 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim5Q8CI51 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim5Q8CI51 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim5Q8CI51 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim5Q8CI51 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim5Q8CI51 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Pdlim5Q8CI51 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim5Q8CI51 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim5Q8CI51 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim5Q8CI51 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Pdlim5Q8CI51 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim5Q8CI51 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim5Q8CI51 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim5Q8CI51 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pdlim5Q8CI51 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pdlim5Q8CI51 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pdlim5Q8CI51 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pdlim5Q8CI51 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.7■□□□□ 0.58
Pdlim5Q8CI51 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC18.7■□□□□ 0.58
Pdlim5Q8CI51 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pdlim5Q8CI51 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pdlim5Q8CI51 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pdlim5Q8CI51 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.69■□□□□ 0.58
Pdlim5Q8CI51 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
Pdlim5Q8CI51 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.69■□□□□ 0.58
Pdlim5Q8CI51 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.69■□□□□ 0.58
Pdlim5Q8CI51 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Pdlim5Q8CI51 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pdlim5Q8CI51 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.69■□□□□ 0.58
Pdlim5Q8CI51 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pdlim5Q8CI51 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pdlim5Q8CI51 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Pdlim5Q8CI51 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pdlim5Q8CI51 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pdlim5Q8CI51 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pdlim5Q8CI51 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pdlim5Q8CI51 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pdlim5Q8CI51 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Pdlim5Q8CI51 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Pdlim5Q8CI51 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.67■□□□□ 0.58
Pdlim5Q8CI51 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.67■□□□□ 0.58
Pdlim5Q8CI51 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Pdlim5Q8CI51 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pdlim5Q8CI51 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pdlim5Q8CI51 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pdlim5Q8CI51 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim5Q8CI51 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim5Q8CI51 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pdlim5Q8CI51 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pdlim5Q8CI51 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pdlim5Q8CI51 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim5Q8CI51 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim5Q8CI51 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim5Q8CI51 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim5Q8CI51 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim5Q8CI51 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim5Q8CI51 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim5Q8CI51 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pdlim5Q8CI51 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.65■□□□□ 0.58
Pdlim5Q8CI51 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Pdlim5Q8CI51 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pdlim5Q8CI51 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pdlim5Q8CI51 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pdlim5Q8CI51 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Pdlim5Q8CI51 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.65■□□□□ 0.58
Pdlim5Q8CI51 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Pdlim5Q8CI51 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Pdlim5Q8CI51 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Pdlim5Q8CI51 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pdlim5Q8CI51 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
Pdlim5Q8CI51 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pdlim5Q8CI51 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.64■□□□□ 0.57
Pdlim5Q8CI51 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim5Q8CI51 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim5Q8CI51 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Pdlim5Q8CI51 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim5Q8CI51 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim5Q8CI51 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim5Q8CI51 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim5Q8CI51 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Pdlim5Q8CI51 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdlim5Q8CI51 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdlim5Q8CI51 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.62■□□□□ 0.57
Pdlim5Q8CI51 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdlim5Q8CI51 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pdlim5Q8CI51 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.62■□□□□ 0.57
Pdlim5Q8CI51 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdlim5Q8CI51 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdlim5Q8CI51 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdlim5Q8CI51 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdlim5Q8CI51 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms