Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.54■□□□□ 0.72
Slc46a2Q8CA03 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc46a2Q8CA03 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Slc46a2Q8CA03 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.54■□□□□ 0.72
Slc46a2Q8CA03 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Slc46a2Q8CA03 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Slc46a2Q8CA03 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Slc46a2Q8CA03 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc46a2Q8CA03 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc46a2Q8CA03 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc46a2Q8CA03 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.53■□□□□ 0.72
Slc46a2Q8CA03 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.53■□□□□ 0.72
Slc46a2Q8CA03 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.53■□□□□ 0.72
Slc46a2Q8CA03 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Slc46a2Q8CA03 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Slc46a2Q8CA03 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Slc46a2Q8CA03 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc46a2Q8CA03 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc46a2Q8CA03 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc46a2Q8CA03 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc46a2Q8CA03 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc46a2Q8CA03 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.52■□□□□ 0.72
Slc46a2Q8CA03 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Slc46a2Q8CA03 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Slc46a2Q8CA03 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Slc46a2Q8CA03 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Slc46a2Q8CA03 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc46a2Q8CA03 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Slc46a2Q8CA03 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Slc46a2Q8CA03 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Slc46a2Q8CA03 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Slc46a2Q8CA03 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.51■□□□□ 0.71
Slc46a2Q8CA03 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Slc46a2Q8CA03 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc46a2Q8CA03 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.5■□□□□ 0.71
Slc46a2Q8CA03 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Slc46a2Q8CA03 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.5■□□□□ 0.71
Slc46a2Q8CA03 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Slc46a2Q8CA03 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Slc46a2Q8CA03 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Slc46a2Q8CA03 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Slc46a2Q8CA03 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Slc46a2Q8CA03 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Slc46a2Q8CA03 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc46a2Q8CA03 Gm14523-201ENSMUST00000117260 558 ntBASIC19.49■□□□□ 0.71
Slc46a2Q8CA03 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Slc46a2Q8CA03 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc46a2Q8CA03 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Slc46a2Q8CA03 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Slc46a2Q8CA03 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.48■□□□□ 0.71
Slc46a2Q8CA03 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.48■□□□□ 0.71
Slc46a2Q8CA03 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Slc46a2Q8CA03 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Slc46a2Q8CA03 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Slc46a2Q8CA03 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Slc46a2Q8CA03 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.47■□□□□ 0.71
Slc46a2Q8CA03 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.47■□□□□ 0.71
Slc46a2Q8CA03 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc46a2Q8CA03 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Slc46a2Q8CA03 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc46a2Q8CA03 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc46a2Q8CA03 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.47■□□□□ 0.71
Slc46a2Q8CA03 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc46a2Q8CA03 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc46a2Q8CA03 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Slc46a2Q8CA03 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc46a2Q8CA03 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc46a2Q8CA03 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc46a2Q8CA03 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Slc46a2Q8CA03 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc46a2Q8CA03 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc46a2Q8CA03 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc46a2Q8CA03 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.46■□□□□ 0.71
Slc46a2Q8CA03 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc46a2Q8CA03 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc46a2Q8CA03 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.46■□□□□ 0.71
Slc46a2Q8CA03 Gm27502-201ENSMUST00000183495 199 ntBASIC19.46■□□□□ 0.71
Slc46a2Q8CA03 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Slc46a2Q8CA03 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.45■□□□□ 0.7
Slc46a2Q8CA03 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Slc46a2Q8CA03 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc46a2Q8CA03 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.45■□□□□ 0.7
Slc46a2Q8CA03 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Slc46a2Q8CA03 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc46a2Q8CA03 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Slc46a2Q8CA03 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
Slc46a2Q8CA03 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Slc46a2Q8CA03 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc46a2Q8CA03 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.44■□□□□ 0.7
Slc46a2Q8CA03 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Slc46a2Q8CA03 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Slc46a2Q8CA03 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Slc46a2Q8CA03 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc46a2Q8CA03 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC19.44■□□□□ 0.7
Slc46a2Q8CA03 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Slc46a2Q8CA03 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc46a2Q8CA03 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc46a2Q8CA03 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Slc46a2Q8CA03 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.44■□□□□ 0.7
Slc46a2Q8CA03 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 191.3 ms