Protein–RNA interactions for Protein: Q8BXQ3

Lrtm1, Leucine-rich repeat and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrtm1Q8BXQ3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Lrtm1Q8BXQ3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrtm1Q8BXQ3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
Lrtm1Q8BXQ3 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
Lrtm1Q8BXQ3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lrtm1Q8BXQ3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrtm1Q8BXQ3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrtm1Q8BXQ3 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lrtm1Q8BXQ3 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrtm1Q8BXQ3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lrtm1Q8BXQ3 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Lrtm1Q8BXQ3 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.75■□□□□ 0.43
Lrtm1Q8BXQ3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lrtm1Q8BXQ3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.75■□□□□ 0.43
Lrtm1Q8BXQ3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.75■□□□□ 0.43
Lrtm1Q8BXQ3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
Lrtm1Q8BXQ3 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lrtm1Q8BXQ3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrtm1Q8BXQ3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrtm1Q8BXQ3 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrtm1Q8BXQ3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.74■□□□□ 0.43
Lrtm1Q8BXQ3 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrtm1Q8BXQ3 Gm12922-201ENSMUST00000120626 809 ntBASIC17.74■□□□□ 0.43
Lrtm1Q8BXQ3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.74■□□□□ 0.43
Lrtm1Q8BXQ3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.74■□□□□ 0.43
Lrtm1Q8BXQ3 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Lrtm1Q8BXQ3 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.74■□□□□ 0.43
Lrtm1Q8BXQ3 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Lrtm1Q8BXQ3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrtm1Q8BXQ3 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrtm1Q8BXQ3 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrtm1Q8BXQ3 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrtm1Q8BXQ3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrtm1Q8BXQ3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrtm1Q8BXQ3 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lrtm1Q8BXQ3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrtm1Q8BXQ3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrtm1Q8BXQ3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrtm1Q8BXQ3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrtm1Q8BXQ3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.73■□□□□ 0.43
Lrtm1Q8BXQ3 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Lrtm1Q8BXQ3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Lrtm1Q8BXQ3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrtm1Q8BXQ3 Golgb1-201ENSMUST00000023534 498 ntBASIC17.73■□□□□ 0.43
Lrtm1Q8BXQ3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrtm1Q8BXQ3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Lrtm1Q8BXQ3 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrtm1Q8BXQ3 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrtm1Q8BXQ3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Lrtm1Q8BXQ3 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Lrtm1Q8BXQ3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrtm1Q8BXQ3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrtm1Q8BXQ3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Lrtm1Q8BXQ3 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Lrtm1Q8BXQ3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
Lrtm1Q8BXQ3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Lrtm1Q8BXQ3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.72■□□□□ 0.43
Lrtm1Q8BXQ3 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
Lrtm1Q8BXQ3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Lrtm1Q8BXQ3 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lrtm1Q8BXQ3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Lrtm1Q8BXQ3 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lrtm1Q8BXQ3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Lrtm1Q8BXQ3 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.71■□□□□ 0.43
Lrtm1Q8BXQ3 Gm9847-201ENSMUST00000052528 599 ntBASIC17.71■□□□□ 0.43
Lrtm1Q8BXQ3 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lrtm1Q8BXQ3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lrtm1Q8BXQ3 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lrtm1Q8BXQ3 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Lrtm1Q8BXQ3 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.7■□□□□ 0.42
Lrtm1Q8BXQ3 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.7■□□□□ 0.42
Lrtm1Q8BXQ3 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.7■□□□□ 0.42
Lrtm1Q8BXQ3 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lrtm1Q8BXQ3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lrtm1Q8BXQ3 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.7■□□□□ 0.42
Lrtm1Q8BXQ3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lrtm1Q8BXQ3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lrtm1Q8BXQ3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lrtm1Q8BXQ3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Lrtm1Q8BXQ3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.7■□□□□ 0.42
Lrtm1Q8BXQ3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lrtm1Q8BXQ3 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Lrtm1Q8BXQ3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.69■□□□□ 0.42
Lrtm1Q8BXQ3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.69■□□□□ 0.42
Lrtm1Q8BXQ3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Lrtm1Q8BXQ3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lrtm1Q8BXQ3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lrtm1Q8BXQ3 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lrtm1Q8BXQ3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lrtm1Q8BXQ3 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lrtm1Q8BXQ3 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lrtm1Q8BXQ3 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lrtm1Q8BXQ3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Lrtm1Q8BXQ3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lrtm1Q8BXQ3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lrtm1Q8BXQ3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Lrtm1Q8BXQ3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Lrtm1Q8BXQ3 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lrtm1Q8BXQ3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Lrtm1Q8BXQ3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms