Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SynbQ8BI41 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SynbQ8BI41 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.28■□□□□ 0.68
SynbQ8BI41 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SynbQ8BI41 Gm6139-201ENSMUST00000079261 882 ntBASIC19.28■□□□□ 0.68
SynbQ8BI41 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SynbQ8BI41 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SynbQ8BI41 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.28■□□□□ 0.68
SynbQ8BI41 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.27■□□□□ 0.68
SynbQ8BI41 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SynbQ8BI41 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SynbQ8BI41 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.68
SynbQ8BI41 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SynbQ8BI41 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
SynbQ8BI41 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SynbQ8BI41 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SynbQ8BI41 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SynbQ8BI41 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SynbQ8BI41 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.26■□□□□ 0.67
SynbQ8BI41 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SynbQ8BI41 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SynbQ8BI41 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.25■□□□□ 0.67
SynbQ8BI41 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SynbQ8BI41 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SynbQ8BI41 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.25■□□□□ 0.67
SynbQ8BI41 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
SynbQ8BI41 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.25■□□□□ 0.67
SynbQ8BI41 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.25■□□□□ 0.67
SynbQ8BI41 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SynbQ8BI41 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SynbQ8BI41 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SynbQ8BI41 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.24■□□□□ 0.67
SynbQ8BI41 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SynbQ8BI41 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
SynbQ8BI41 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
SynbQ8BI41 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SynbQ8BI41 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SynbQ8BI41 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SynbQ8BI41 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SynbQ8BI41 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SynbQ8BI41 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.23■□□□□ 0.67
SynbQ8BI41 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SynbQ8BI41 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SynbQ8BI41 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
SynbQ8BI41 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
SynbQ8BI41 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.23■□□□□ 0.67
SynbQ8BI41 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SynbQ8BI41 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SynbQ8BI41 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SynbQ8BI41 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SynbQ8BI41 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SynbQ8BI41 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SynbQ8BI41 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.22■□□□□ 0.67
SynbQ8BI41 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SynbQ8BI41 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.22■□□□□ 0.67
SynbQ8BI41 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SynbQ8BI41 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SynbQ8BI41 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SynbQ8BI41 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.22■□□□□ 0.67
SynbQ8BI41 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SynbQ8BI41 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SynbQ8BI41 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
SynbQ8BI41 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SynbQ8BI41 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SynbQ8BI41 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SynbQ8BI41 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SynbQ8BI41 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SynbQ8BI41 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
SynbQ8BI41 Gm43137-201ENSMUST00000198052 594 ntBASIC19.21■□□□□ 0.67
SynbQ8BI41 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SynbQ8BI41 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SynbQ8BI41 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SynbQ8BI41 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.21■□□□□ 0.67
SynbQ8BI41 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SynbQ8BI41 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
SynbQ8BI41 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SynbQ8BI41 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SynbQ8BI41 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.2■□□□□ 0.66
SynbQ8BI41 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.2■□□□□ 0.66
SynbQ8BI41 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.2■□□□□ 0.66
SynbQ8BI41 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SynbQ8BI41 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SynbQ8BI41 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SynbQ8BI41 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SynbQ8BI41 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SynbQ8BI41 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.2■□□□□ 0.66
SynbQ8BI41 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SynbQ8BI41 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SynbQ8BI41 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SynbQ8BI41 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
SynbQ8BI41 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SynbQ8BI41 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SynbQ8BI41 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SynbQ8BI41 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SynbQ8BI41 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SynbQ8BI41 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
SynbQ8BI41 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SynbQ8BI41 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SynbQ8BI41 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SynbQ8BI41 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms