Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Srrm3Q80WV7 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Srrm3Q80WV7 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.14■□□□□ 0.97
Srrm3Q80WV7 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Srrm3Q80WV7 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Srrm3Q80WV7 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Srrm3Q80WV7 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Srrm3Q80WV7 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Srrm3Q80WV7 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Srrm3Q80WV7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Srrm3Q80WV7 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
Srrm3Q80WV7 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Srrm3Q80WV7 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.13■□□□□ 0.97
Srrm3Q80WV7 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.13■□□□□ 0.97
Srrm3Q80WV7 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Srrm3Q80WV7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Srrm3Q80WV7 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Srrm3Q80WV7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Srrm3Q80WV7 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Srrm3Q80WV7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.12■□□□□ 0.97
Srrm3Q80WV7 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Srrm3Q80WV7 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
Srrm3Q80WV7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Srrm3Q80WV7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Srrm3Q80WV7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Srrm3Q80WV7 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.11■□□□□ 0.97
Srrm3Q80WV7 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Srrm3Q80WV7 Gm44428-201ENSMUST00000204474 874 ntBASIC21.11■□□□□ 0.97
Srrm3Q80WV7 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
Srrm3Q80WV7 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Srrm3Q80WV7 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Srrm3Q80WV7 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Srrm3Q80WV7 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.1■□□□□ 0.97
Srrm3Q80WV7 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Srrm3Q80WV7 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.1■□□□□ 0.97
Srrm3Q80WV7 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Srrm3Q80WV7 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Srrm3Q80WV7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC21.09■□□□□ 0.97
Srrm3Q80WV7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Srrm3Q80WV7 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
Srrm3Q80WV7 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Srrm3Q80WV7 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.09■□□□□ 0.97
Srrm3Q80WV7 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.09■□□□□ 0.97
Srrm3Q80WV7 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.09■□□□□ 0.97
Srrm3Q80WV7 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.09■□□□□ 0.97
Srrm3Q80WV7 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Srrm3Q80WV7 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Srrm3Q80WV7 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Srrm3Q80WV7 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Srrm3Q80WV7 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.09■□□□□ 0.97
Srrm3Q80WV7 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Srrm3Q80WV7 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Srrm3Q80WV7 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Srrm3Q80WV7 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC21.08■□□□□ 0.97
Srrm3Q80WV7 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Srrm3Q80WV7 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.08■□□□□ 0.97
Srrm3Q80WV7 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Srrm3Q80WV7 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Srrm3Q80WV7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.08■□□□□ 0.96
Srrm3Q80WV7 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Srrm3Q80WV7 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Srrm3Q80WV7 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Srrm3Q80WV7 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Srrm3Q80WV7 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Srrm3Q80WV7 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Srrm3Q80WV7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Srrm3Q80WV7 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.07■□□□□ 0.96
Srrm3Q80WV7 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Srrm3Q80WV7 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Srrm3Q80WV7 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Srrm3Q80WV7 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Srrm3Q80WV7 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Srrm3Q80WV7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Srrm3Q80WV7 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Srrm3Q80WV7 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.06■□□□□ 0.96
Srrm3Q80WV7 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Srrm3Q80WV7 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Srrm3Q80WV7 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.06■□□□□ 0.96
Srrm3Q80WV7 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Srrm3Q80WV7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Srrm3Q80WV7 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Srrm3Q80WV7 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Srrm3Q80WV7 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Srrm3Q80WV7 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Srrm3Q80WV7 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Srrm3Q80WV7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Srrm3Q80WV7 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Srrm3Q80WV7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Srrm3Q80WV7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC21.04■□□□□ 0.96
Srrm3Q80WV7 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Srrm3Q80WV7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Srrm3Q80WV7 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.04■□□□□ 0.96
Srrm3Q80WV7 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Srrm3Q80WV7 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.04■□□□□ 0.96
Srrm3Q80WV7 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Srrm3Q80WV7 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Srrm3Q80WV7 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Srrm3Q80WV7 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Srrm3Q80WV7 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Srrm3Q80WV7 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms