Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.49■□□□□ 0.71
Rfx4Q7TNK1 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Rfx4Q7TNK1 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rfx4Q7TNK1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.49■□□□□ 0.71
Rfx4Q7TNK1 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.49■□□□□ 0.71
Rfx4Q7TNK1 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.49■□□□□ 0.71
Rfx4Q7TNK1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rfx4Q7TNK1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rfx4Q7TNK1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rfx4Q7TNK1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rfx4Q7TNK1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfx4Q7TNK1 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.48■□□□□ 0.71
Rfx4Q7TNK1 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Rfx4Q7TNK1 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfx4Q7TNK1 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfx4Q7TNK1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rfx4Q7TNK1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.48■□□□□ 0.71
Rfx4Q7TNK1 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Rfx4Q7TNK1 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfx4Q7TNK1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfx4Q7TNK1 Scarna2-201ENSMUST00000157560 414 ntBASIC19.47■□□□□ 0.71
Rfx4Q7TNK1 Gm16437-201ENSMUST00000025669 507 ntBASIC19.47■□□□□ 0.71
Rfx4Q7TNK1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Rfx4Q7TNK1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.47■□□□□ 0.71
Rfx4Q7TNK1 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rfx4Q7TNK1 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfx4Q7TNK1 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfx4Q7TNK1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rfx4Q7TNK1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx4Q7TNK1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx4Q7TNK1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx4Q7TNK1 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx4Q7TNK1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Rfx4Q7TNK1 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx4Q7TNK1 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx4Q7TNK1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx4Q7TNK1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rfx4Q7TNK1 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Rfx4Q7TNK1 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfx4Q7TNK1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.45■□□□□ 0.7
Rfx4Q7TNK1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfx4Q7TNK1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfx4Q7TNK1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfx4Q7TNK1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rfx4Q7TNK1 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx4Q7TNK1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx4Q7TNK1 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Rfx4Q7TNK1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx4Q7TNK1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx4Q7TNK1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx4Q7TNK1 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx4Q7TNK1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rfx4Q7TNK1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Rfx4Q7TNK1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
Rfx4Q7TNK1 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.44■□□□□ 0.7
Rfx4Q7TNK1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx4Q7TNK1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx4Q7TNK1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx4Q7TNK1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Rfx4Q7TNK1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx4Q7TNK1 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx4Q7TNK1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx4Q7TNK1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx4Q7TNK1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx4Q7TNK1 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx4Q7TNK1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Rfx4Q7TNK1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rfx4Q7TNK1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx4Q7TNK1 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx4Q7TNK1 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx4Q7TNK1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.42■□□□□ 0.7
Rfx4Q7TNK1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
Rfx4Q7TNK1 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.42■□□□□ 0.7
Rfx4Q7TNK1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.42■□□□□ 0.7
Rfx4Q7TNK1 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx4Q7TNK1 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rfx4Q7TNK1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx4Q7TNK1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx4Q7TNK1 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx4Q7TNK1 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx4Q7TNK1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx4Q7TNK1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx4Q7TNK1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx4Q7TNK1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx4Q7TNK1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.4■□□□□ 0.7
Rfx4Q7TNK1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx4Q7TNK1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx4Q7TNK1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx4Q7TNK1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx4Q7TNK1 Gm11687-201ENSMUST00000118911 886 ntBASIC19.4■□□□□ 0.7
Rfx4Q7TNK1 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx4Q7TNK1 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.39■□□□□ 0.7
Rfx4Q7TNK1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rfx4Q7TNK1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Rfx4Q7TNK1 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rfx4Q7TNK1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
Rfx4Q7TNK1 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx4Q7TNK1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.39■□□□□ 0.69
Rfx4Q7TNK1 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx4Q7TNK1 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 238.1 ms