Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC16.52■□□□□ 0.24
Vma21Q78T54 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC16.52■□□□□ 0.24
Vma21Q78T54 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC16.52■□□□□ 0.24
Vma21Q78T54 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Vma21Q78T54 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vma21Q78T54 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Vma21Q78T54 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Vma21Q78T54 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Vma21Q78T54 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vma21Q78T54 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Vma21Q78T54 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.51■□□□□ 0.23
Vma21Q78T54 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Vma21Q78T54 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Vma21Q78T54 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vma21Q78T54 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Vma21Q78T54 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vma21Q78T54 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vma21Q78T54 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Vma21Q78T54 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vma21Q78T54 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vma21Q78T54 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vma21Q78T54 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vma21Q78T54 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Vma21Q78T54 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Vma21Q78T54 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vma21Q78T54 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vma21Q78T54 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vma21Q78T54 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Vma21Q78T54 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Vma21Q78T54 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Vma21Q78T54 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vma21Q78T54 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vma21Q78T54 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vma21Q78T54 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vma21Q78T54 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Vma21Q78T54 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vma21Q78T54 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vma21Q78T54 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vma21Q78T54 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Vma21Q78T54 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vma21Q78T54 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vma21Q78T54 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Vma21Q78T54 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Vma21Q78T54 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vma21Q78T54 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vma21Q78T54 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vma21Q78T54 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vma21Q78T54 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vma21Q78T54 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Vma21Q78T54 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vma21Q78T54 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vma21Q78T54 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Vma21Q78T54 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vma21Q78T54 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Vma21Q78T54 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Vma21Q78T54 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vma21Q78T54 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Vma21Q78T54 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vma21Q78T54 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vma21Q78T54 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.47■□□□□ 0.23
Vma21Q78T54 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vma21Q78T54 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Vma21Q78T54 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vma21Q78T54 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.47■□□□□ 0.23
Vma21Q78T54 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Vma21Q78T54 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.47■□□□□ 0.23
Vma21Q78T54 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.47■□□□□ 0.23
Vma21Q78T54 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Vma21Q78T54 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Vma21Q78T54 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Vma21Q78T54 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vma21Q78T54 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Vma21Q78T54 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vma21Q78T54 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Vma21Q78T54 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC16.46■□□□□ 0.23
Vma21Q78T54 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Vma21Q78T54 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.46■□□□□ 0.23
Vma21Q78T54 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Vma21Q78T54 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vma21Q78T54 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vma21Q78T54 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vma21Q78T54 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vma21Q78T54 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Vma21Q78T54 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Vma21Q78T54 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Vma21Q78T54 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vma21Q78T54 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vma21Q78T54 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vma21Q78T54 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Vma21Q78T54 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vma21Q78T54 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Vma21Q78T54 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Vma21Q78T54 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
Vma21Q78T54 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vma21Q78T54 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Vma21Q78T54 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Vma21Q78T54 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Vma21Q78T54 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.44■□□□□ 0.22
Vma21Q78T54 Gm45444-201ENSMUST00000211394 898 ntBASIC16.44■□□□□ 0.22
Vma21Q78T54 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms