Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
Scn10aQ6QIY3 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC23.65■■□□□ 1.38
Scn10aQ6QIY3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Scn10aQ6QIY3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Scn10aQ6QIY3 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC23.64■■□□□ 1.38
Scn10aQ6QIY3 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
Scn10aQ6QIY3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Scn10aQ6QIY3 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Scn10aQ6QIY3 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Scn10aQ6QIY3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Scn10aQ6QIY3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Scn10aQ6QIY3 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Scn10aQ6QIY3 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC23.63■■□□□ 1.37
Scn10aQ6QIY3 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Scn10aQ6QIY3 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Scn10aQ6QIY3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Scn10aQ6QIY3 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Scn10aQ6QIY3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC23.62■■□□□ 1.37
Scn10aQ6QIY3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC23.62■■□□□ 1.37
Scn10aQ6QIY3 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Scn10aQ6QIY3 Gm12933-201ENSMUST00000120203 872 ntBASIC23.62■■□□□ 1.37
Scn10aQ6QIY3 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC23.62■■□□□ 1.37
Scn10aQ6QIY3 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
Scn10aQ6QIY3 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Scn10aQ6QIY3 AC153962.1-201ENSMUST00000218530 1948 ntBASIC23.62■■□□□ 1.37
Scn10aQ6QIY3 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
Scn10aQ6QIY3 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC23.61■■□□□ 1.37
Scn10aQ6QIY3 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Scn10aQ6QIY3 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Scn10aQ6QIY3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Scn10aQ6QIY3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Scn10aQ6QIY3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Scn10aQ6QIY3 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Scn10aQ6QIY3 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC23.6■■□□□ 1.37
Scn10aQ6QIY3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC23.6■■□□□ 1.37
Scn10aQ6QIY3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Scn10aQ6QIY3 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
Scn10aQ6QIY3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Scn10aQ6QIY3 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC23.6■■□□□ 1.37
Scn10aQ6QIY3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Scn10aQ6QIY3 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
Scn10aQ6QIY3 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC23.59■■□□□ 1.37
Scn10aQ6QIY3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Scn10aQ6QIY3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
Scn10aQ6QIY3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Scn10aQ6QIY3 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
Scn10aQ6QIY3 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC23.58■■□□□ 1.37
Scn10aQ6QIY3 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
Scn10aQ6QIY3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC23.58■■□□□ 1.37
Scn10aQ6QIY3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Scn10aQ6QIY3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Scn10aQ6QIY3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Scn10aQ6QIY3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.36
Scn10aQ6QIY3 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC23.58■■□□□ 1.36
Scn10aQ6QIY3 Gm14281-201ENSMUST00000121700 1294 ntBASIC23.58■■□□□ 1.36
Scn10aQ6QIY3 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Scn10aQ6QIY3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Scn10aQ6QIY3 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Scn10aQ6QIY3 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Scn10aQ6QIY3 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC23.57■■□□□ 1.36
Scn10aQ6QIY3 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Scn10aQ6QIY3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Scn10aQ6QIY3 Gm42418-201ENSMUST00000182010 1831 ntBASIC23.57■■□□□ 1.36
Scn10aQ6QIY3 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC23.56■■□□□ 1.36
Scn10aQ6QIY3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC23.56■■□□□ 1.36
Scn10aQ6QIY3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Scn10aQ6QIY3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Scn10aQ6QIY3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Scn10aQ6QIY3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Scn10aQ6QIY3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC23.56■■□□□ 1.36
Scn10aQ6QIY3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Scn10aQ6QIY3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Scn10aQ6QIY3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Scn10aQ6QIY3 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Scn10aQ6QIY3 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Scn10aQ6QIY3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Scn10aQ6QIY3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC23.55■■□□□ 1.36
Scn10aQ6QIY3 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
Scn10aQ6QIY3 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Scn10aQ6QIY3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Scn10aQ6QIY3 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Scn10aQ6QIY3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Scn10aQ6QIY3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Scn10aQ6QIY3 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Scn10aQ6QIY3 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC23.54■■□□□ 1.36
Scn10aQ6QIY3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
Scn10aQ6QIY3 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Scn10aQ6QIY3 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Scn10aQ6QIY3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Scn10aQ6QIY3 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Scn10aQ6QIY3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Scn10aQ6QIY3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Scn10aQ6QIY3 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Scn10aQ6QIY3 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Scn10aQ6QIY3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Scn10aQ6QIY3 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC23.52■■□□□ 1.36
Scn10aQ6QIY3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC23.52■■□□□ 1.36
Scn10aQ6QIY3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Scn10aQ6QIY3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Scn10aQ6QIY3 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms