Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Snrnp40Q6PE01 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC18.03■□□□□ 0.48
Snrnp40Q6PE01 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.03■□□□□ 0.48
Snrnp40Q6PE01 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Snrnp40Q6PE01 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Snrnp40Q6PE01 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Snrnp40Q6PE01 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Snrnp40Q6PE01 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Snrnp40Q6PE01 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Snrnp40Q6PE01 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Snrnp40Q6PE01 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.02■□□□□ 0.48
Snrnp40Q6PE01 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Snrnp40Q6PE01 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Snrnp40Q6PE01 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Snrnp40Q6PE01 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.02■□□□□ 0.47
Snrnp40Q6PE01 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp40Q6PE01 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.01■□□□□ 0.47
Snrnp40Q6PE01 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp40Q6PE01 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp40Q6PE01 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp40Q6PE01 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp40Q6PE01 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp40Q6PE01 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Snrnp40Q6PE01 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp40Q6PE01 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp40Q6PE01 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp40Q6PE01 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Snrnp40Q6PE01 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Snrnp40Q6PE01 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18■□□□□ 0.47
Snrnp40Q6PE01 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18■□□□□ 0.47
Snrnp40Q6PE01 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Snrnp40Q6PE01 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Snrnp40Q6PE01 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18■□□□□ 0.47
Snrnp40Q6PE01 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18■□□□□ 0.47
Snrnp40Q6PE01 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Snrnp40Q6PE01 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18■□□□□ 0.47
Snrnp40Q6PE01 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18■□□□□ 0.47
Snrnp40Q6PE01 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Snrnp40Q6PE01 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Snrnp40Q6PE01 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Snrnp40Q6PE01 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Snrnp40Q6PE01 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Snrnp40Q6PE01 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Snrnp40Q6PE01 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.99■□□□□ 0.47
Snrnp40Q6PE01 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Snrnp40Q6PE01 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Snrnp40Q6PE01 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.99■□□□□ 0.47
Snrnp40Q6PE01 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.99■□□□□ 0.47
Snrnp40Q6PE01 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Snrnp40Q6PE01 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Snrnp40Q6PE01 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.99■□□□□ 0.47
Snrnp40Q6PE01 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Snrnp40Q6PE01 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Snrnp40Q6PE01 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp40Q6PE01 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp40Q6PE01 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp40Q6PE01 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp40Q6PE01 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Snrnp40Q6PE01 Gm11421-201ENSMUST00000122124 294 ntBASIC17.98■□□□□ 0.47
Snrnp40Q6PE01 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.98■□□□□ 0.47
Snrnp40Q6PE01 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp40Q6PE01 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp40Q6PE01 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp40Q6PE01 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp40Q6PE01 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.98■□□□□ 0.47
Snrnp40Q6PE01 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Snrnp40Q6PE01 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Snrnp40Q6PE01 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.97■□□□□ 0.47
Snrnp40Q6PE01 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Snrnp40Q6PE01 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Snrnp40Q6PE01 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.97■□□□□ 0.47
Snrnp40Q6PE01 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Snrnp40Q6PE01 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Snrnp40Q6PE01 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.96■□□□□ 0.47
Snrnp40Q6PE01 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Snrnp40Q6PE01 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Snrnp40Q6PE01 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Snrnp40Q6PE01 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Snrnp40Q6PE01 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Snrnp40Q6PE01 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Snrnp40Q6PE01 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Snrnp40Q6PE01 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.96■□□□□ 0.47
Snrnp40Q6PE01 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Snrnp40Q6PE01 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Snrnp40Q6PE01 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Snrnp40Q6PE01 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Snrnp40Q6PE01 Il17rd-202ENSMUST00000223942 2186 ntBASIC17.96■□□□□ 0.46
Snrnp40Q6PE01 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Snrnp40Q6PE01 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.95■□□□□ 0.46
Snrnp40Q6PE01 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Snrnp40Q6PE01 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Snrnp40Q6PE01 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.95■□□□□ 0.46
Snrnp40Q6PE01 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.95■□□□□ 0.46
Snrnp40Q6PE01 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Snrnp40Q6PE01 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Snrnp40Q6PE01 Gm10602-201ENSMUST00000098239 609 ntBASIC17.95■□□□□ 0.46
Snrnp40Q6PE01 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Snrnp40Q6PE01 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Snrnp40Q6PE01 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Snrnp40Q6PE01 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms