Protein–RNA interactions for Protein: Q61657

Hes3, Transcription factor HES-3, mousemouse

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hes3Q61657 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hes3Q61657 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
Hes3Q61657 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hes3Q61657 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Hes3Q61657 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Hes3Q61657 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hes3Q61657 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.5■□□□□ 0.39
Hes3Q61657 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Hes3Q61657 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Hes3Q61657 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Hes3Q61657 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hes3Q61657 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.5■□□□□ 0.39
Hes3Q61657 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.5■□□□□ 0.39
Hes3Q61657 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hes3Q61657 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hes3Q61657 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hes3Q61657 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hes3Q61657 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Hes3Q61657 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hes3Q61657 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Hes3Q61657 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Hes3Q61657 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hes3Q61657 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Hes3Q61657 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hes3Q61657 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Hes3Q61657 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hes3Q61657 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hes3Q61657 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.48■□□□□ 0.39
Hes3Q61657 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hes3Q61657 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hes3Q61657 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hes3Q61657 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hes3Q61657 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hes3Q61657 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Hes3Q61657 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hes3Q61657 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Hes3Q61657 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.48■□□□□ 0.39
Hes3Q61657 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hes3Q61657 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hes3Q61657 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Hes3Q61657 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hes3Q61657 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hes3Q61657 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hes3Q61657 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hes3Q61657 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Hes3Q61657 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hes3Q61657 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hes3Q61657 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hes3Q61657 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Hes3Q61657 Gm5921-201ENSMUST00000075898 882 ntBASIC17.47■□□□□ 0.39
Hes3Q61657 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hes3Q61657 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hes3Q61657 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hes3Q61657 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hes3Q61657 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.47■□□□□ 0.39
Hes3Q61657 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.47■□□□□ 0.39
Hes3Q61657 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.46■□□□□ 0.39
Hes3Q61657 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hes3Q61657 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hes3Q61657 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hes3Q61657 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hes3Q61657 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hes3Q61657 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.46■□□□□ 0.39
Hes3Q61657 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hes3Q61657 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.46■□□□□ 0.39
Hes3Q61657 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Hes3Q61657 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Hes3Q61657 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hes3Q61657 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Hes3Q61657 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hes3Q61657 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Hes3Q61657 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hes3Q61657 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.45■□□□□ 0.38
Hes3Q61657 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.45■□□□□ 0.38
Hes3Q61657 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Hes3Q61657 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.45■□□□□ 0.38
Hes3Q61657 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hes3Q61657 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Hes3Q61657 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.45■□□□□ 0.38
Hes3Q61657 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hes3Q61657 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hes3Q61657 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hes3Q61657 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hes3Q61657 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hes3Q61657 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hes3Q61657 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Hes3Q61657 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.44■□□□□ 0.38
Hes3Q61657 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hes3Q61657 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hes3Q61657 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hes3Q61657 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hes3Q61657 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hes3Q61657 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hes3Q61657 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hes3Q61657 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Hes3Q61657 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hes3Q61657 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hes3Q61657 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Hes3Q61657 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Hes3Q61657 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms