Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clcn4Q61418 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.6■□□□□ 0.57
Clcn4Q61418 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Clcn4Q61418 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clcn4Q61418 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clcn4Q61418 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Clcn4Q61418 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Clcn4Q61418 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.6■□□□□ 0.57
Clcn4Q61418 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Clcn4Q61418 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clcn4Q61418 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Clcn4Q61418 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clcn4Q61418 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.59■□□□□ 0.57
Clcn4Q61418 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clcn4Q61418 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clcn4Q61418 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Clcn4Q61418 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Clcn4Q61418 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Clcn4Q61418 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Clcn4Q61418 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clcn4Q61418 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clcn4Q61418 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clcn4Q61418 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clcn4Q61418 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Clcn4Q61418 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Clcn4Q61418 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clcn4Q61418 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clcn4Q61418 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.58■□□□□ 0.56
Clcn4Q61418 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Clcn4Q61418 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Clcn4Q61418 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Clcn4Q61418 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcn4Q61418 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcn4Q61418 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Clcn4Q61418 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Clcn4Q61418 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcn4Q61418 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcn4Q61418 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcn4Q61418 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcn4Q61418 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Clcn4Q61418 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn4Q61418 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn4Q61418 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Clcn4Q61418 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn4Q61418 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn4Q61418 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn4Q61418 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn4Q61418 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.56■□□□□ 0.56
Clcn4Q61418 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn4Q61418 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn4Q61418 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Clcn4Q61418 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn4Q61418 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn4Q61418 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn4Q61418 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Clcn4Q61418 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Clcn4Q61418 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn4Q61418 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn4Q61418 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn4Q61418 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.55■□□□□ 0.56
Clcn4Q61418 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn4Q61418 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn4Q61418 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn4Q61418 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn4Q61418 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn4Q61418 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn4Q61418 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn4Q61418 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn4Q61418 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Clcn4Q61418 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.54■□□□□ 0.56
Clcn4Q61418 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn4Q61418 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn4Q61418 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.54■□□□□ 0.56
Clcn4Q61418 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn4Q61418 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn4Q61418 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn4Q61418 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn4Q61418 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Clcn4Q61418 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Clcn4Q61418 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.53■□□□□ 0.56
Clcn4Q61418 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Clcn4Q61418 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Clcn4Q61418 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn4Q61418 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.53■□□□□ 0.56
Clcn4Q61418 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn4Q61418 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn4Q61418 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn4Q61418 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn4Q61418 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Clcn4Q61418 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn4Q61418 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn4Q61418 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn4Q61418 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.52■□□□□ 0.56
Clcn4Q61418 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.52■□□□□ 0.56
Clcn4Q61418 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn4Q61418 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn4Q61418 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Clcn4Q61418 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Clcn4Q61418 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Clcn4Q61418 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.51■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms